Publisher
source

Bjarne Winther Kristensen

2 months ago

PhD Fellowship or Postdoc in Brain Tumor Bioinformatics (Spatial Transcriptomics) University of Copenhagen in Denmark

Degree Level

PhD, Postdoc

Field of study

Biomedical Engineering

Funding

Available

Deadline

Expired

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Country

Denmark

University

University of Copenhagen

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Where to contact

Official Email

Keywords

Biomedical Engineering
Biology
Gene Expression
Histology
Python Programming
Human Biology
Neuropsychology
Medical Science
R Programming
Tumor Microenvironment
Rna-seq
Glioblastoma
Brain Tumor
Bioinformatic
Psychoneuroimmunology
Spatial Transcriptomic

About this position

The University of Copenhagen is offering a PhD fellowship or Postdoc position in brain tumor bioinformatics, commencing in March 2026. The successful candidate will join the research group led by Professor and consultant neuropathologist Bjarne Winther Kristensen, based at the Biotech Research and Innovation Center (BRIC), Faculty of Health and Medical Sciences, and the Bartholin Institute, Department of Pathology, Copenhagen University Hospital, Rigshospitalet. The group’s main research interest is understanding how the tumor microenvironment influences brain tumor aggressiveness and therapy response, with a particular focus on glioblastoma. Projects in the group utilize patient tumor tissue, experimental in vitro and in vivo models, and advanced bioinformatics approaches.

The core tasks for the PhD or postdoc will involve bioinformatic investigation of tumor cells and the tumor microenvironment in histologically distinct glioblastoma patient samples, correlating these findings with clinical outcomes. The project will also include analysis of samples from patient-derived animal models. Cutting-edge spatial transcriptomics technologies will be employed, enabling gene expression measurement within intact tumor sections and preserving spatial relationships between malignant, stromal, and immune cells.

The ideal candidate should have a background in biological sciences and documented experience in high-plex spatial transcriptomics or single-cell/nuclei RNA sequencing, or proficiency in R or Python. Applicants must hold an MD or a master’s degree equivalent to a Danish master’s degree (two years) in a relevant field such as human biology, neuroimmunology, or bioinformatics. If the applicant has a PhD, the thesis should be relevant to the project area. Additional assessment criteria include grade point average, professional qualifications, previous publications, relevant work experience, other professional activities, a strong interest in brain tumor biology, and language skills.

The position is full-time (37 hours/week) and limited to a fixed term of 3 years. Salary, pension, and employment conditions follow the Danish Region’s guidelines. The research environment is creative, stimulating, and international, with access to modern laboratories and platforms for spatial analysis.

To apply, submit your application electronically via the provided link before 31 December 2025, 23.59 CET. Required documents include a motivation letter, CV, certified copies of degrees and transcripts, publication list, and optional recommendation letters. Short-listed candidates will be invited for an on-site or virtual interview. For specific information about the fellowship, contact Professor Bjarne Kristensen at [email protected]. General information about PhD studies at the Faculty of Health and Medical Sciences is available on the Graduate School’s website.

This opportunity is ideal for candidates seeking to advance their expertise in brain tumor biology, bioinformatics, and spatial transcriptomics within a leading European research institution.

Funding details

Available

What's required

Applicants must have qualifications corresponding to an MD or a master’s degree related to the subject area of the project, such as human biology, neuroimmunology, or bioinformatics. The master’s degree must be equivalent to a Danish master’s degree (two years). If the applicant has a PhD, the thesis should be relevant to the project area. Candidates should have documented experience in high-plex spatial transcriptomics or single-cell/nuclei RNA sequencing, or experience in R or Python. Additional criteria include grade point average, professional qualifications, previous publications, relevant work experience, other professional activities, a strong interest in brain tumor biology, and language skills.

How to apply

Submit your application electronically via the 'Apply now' link before 31 December 2025, 23.59 CET. Include a motivation letter, CV, certified copies of degrees and transcripts, publication list, and optional recommendation letters. Short-listed candidates will be invited for interview.

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