Basile Wicky
1 week ago
Postdoc in AAV Capsid Engineering with Generative AI – Bioengineering, Computational Biology, Protein Design ETH Zurich in Switzerland
Degree Level
Postdoc
Field of study
Computer Science
Funding
The position is a fully funded 2-year fellowship, including dedicated support for networking and career development. Full access to world-class facilities at both Roche and ETH Zurich campuses in Basel is provided. The program offers end-to-end research ownership and dual supervision by ETH Zurich and Roche principal investigators.
Country
Switzerland
University
ETH Zurich

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About this position
The Department of Biosystems Science and Engineering (D-BSSE) at ETH Zurich, in collaboration with Roche Pharma Research and Early Development (pRED), is offering a prestigious postdoctoral position as part of the Bio-Engineering Systems for Therapeutics (BEST) program under the Next-gen Bioengineers initiative. This interdisciplinary project is based in Basel and focuses on AAV capsid engineering using generative AI, with the goal of advancing gene therapy by overcoming current limitations in tissue tropism, immunity, and manufacturing yields.
The successful candidate will develop and implement state-of-the-art computational workflows for the design of novel AAV capsids, lead the computational design process, and participate in wet lab validation, including library construction, viral production, and NGS-based screening. The role also involves structural analysis using computational biology tools and the integration of high-throughput experimental data to refine generative models. The project is highly collaborative, offering dual supervision by Prof. Basile Wicky (ETH Zurich) and Dr. Denis Phichith (Roche), and provides access to world-class research infrastructure at both institutions.
Applicants must have a PhD in computational biology, bioinformatics, bio-ML, or a related quantitative field, with hands-on experience in generative models for proteins. A strong interdisciplinary drive, excellent communication skills in English, and a willingness to engage in both computational and experimental work are essential. The position is fully funded for two years, with comprehensive support for networking and career development.
To apply, candidates should submit a single PDF containing a motivation letter, CV, publication list, three recommendation letters, research statement, and doctoral certificate via the ETH Zurich online application portal. Applications are reviewed on a rolling basis. For further information, contact Prof. Basile Wicky or Dr. Denis Phichith. This opportunity is ideal for candidates passionate about bioengineering, computational biology, protein design, and translational medicine.
Funding details
The position is a fully funded 2-year fellowship, including dedicated support for networking and career development. Full access to world-class facilities at both Roche and ETH Zurich campuses in Basel is provided. The program offers end-to-end research ownership and dual supervision by ETH Zurich and Roche principal investigators.
What's required
Applicants must hold a PhD degree or equivalent in computational biology, bioinformatics, bio-ML, or a related quantitative field. Hands-on experience with modern generative models for proteins is required. Candidates should have a strong interest in applying computational biology to translational challenges, with high motivation to work at the intersection of wet and dry lab work. AAV experience is welcome but not necessary. Excellent oral and written communication skills in English are required. Willingness to be trained in experimental validation techniques is expected.
How to apply
Submit your application online through the official ETH Zurich application portal. Prepare a single PDF containing a letter of motivation, CV, publication list, three recommendation letters, research statement, and doctoral certificate. Applications via email or post are not accepted. The position will be filled on a rolling basis.
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