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Aalto University

Doctoral Researcher in Probabilistic Machine Learning for Biology-Informed Machine Learning and Dynamical Systems Aalto University in Finland

Degree Level

PhD

Field of study

Computer Science

Funding

Two-year fixed-term doctoral researcher position with an option for two-year renewal. Starting salary is 3168.20 EUR per month. The contract includes occupational health benefits; no tuition or stipend details beyond salary are stated.

Deadline

Oct 21, 2026

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Country

Finland

University

Aalto University

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Keywords

Computer Science
Biomedical Engineering
Biology
Mathematics
Computational Biology
Gaussian Processes
Bayesian Statistics
Dynamical Systems
Statistics
Differential Equation
Applied Mathematic
ML

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About this position

Doctoral Researcher in Probabilistic Machine Learning at Aalto University (Department of Computer Science, School of Science) in Espoo, Finland.

This PhD opening focuses on probabilistic machine learning, statistics, applied mathematics, and computer science, with a research theme in biology-informed machine learning for dynamical systems. The project is centered on developing Biology-Informed Gaussian Processes (BioGPs), Bayesian dynamical models that combine mechanistic ODE components with flexible Gaussian process terms to represent unknown or misspecified biology.

The work sits in a strong research environment spanning the Computational Systems Biology group, Finnish Centre for Artificial Intelligence (FCAI), and ELLIS Institute Finland. Supervision is by Dr Julien Martinelli and Associate Professor Harri Lähdesmäki. The project highlights uncertainty quantification, inference from heterogeneous trajectories, partial observability, integration of uncertain prior knowledge, and interpretable mechanistic ODE discovery. There may also be opportunities to connect with foundation-model approaches for dynamical systems and temporal single-cell data.

Eligibility highlights: strong background in probabilistic machine learning, statistics, applied mathematics, computer science, or a related field; strong programming skills; and a completed master’s degree before the contract starts.

Funding and terms: two-year fixed-term doctoral researcher appointment with an option for two-year renewal. Starting salary is 3168.20 EUR/month. The contract includes occupational health benefits.

Application deadline: 2026-10-21 at 23:59 (UTC+3).

How to apply: submit the application via Aalto’s Workday recruitment system. Prepare one PDF containing your CV, cover letter, academic writing sample, MSc and BSc transcripts, and latest degree certificate.

Funding details

Two-year fixed-term doctoral researcher position with an option for two-year renewal. Starting salary is 3168.20 EUR per month. The contract includes occupational health benefits; no tuition or stipend details beyond salary are stated.

What's required

Applicants should have a strong background in probabilistic machine learning, statistics, applied mathematics, computer science, or a related field, and strong programming skills. The candidate must have completed a master’s degree before the start of the contract period. Application materials include a CV, cover letter aligned with the project, an example of academic writing, transcripts of MSc and BSc studies, and the degree certificate of the latest degree.

How to apply

Submit the application through Aalto University’s Workday recruitment system. Prepare one PDF containing the CV, cover letter, academic writing sample, MSc and BSc transcripts, and latest degree certificate. Apply before the deadline; the position may be filled as soon as a suitable candidate is identified.

More information can be found here

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