Helmholtz Zentrum München Deutsches Forschungszentrum für Umwelt und Gesundheit
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Research Scientist in Spatial Multi-Omics Analysis (Postdoctoral/Research Scientist Position) Helmholtz Zentrum München - Deutsches Forschungszentrum für Gesundheit und Umwelt in Germany
Degree Level
Postdoc
Field of study
Computer Science
Funding
Full-time fixed-term position for 2 years at Helmholtz Munich. Salary may be up to E 13 under TVöD if all requirements are met. Social benefits are based on the Collective Wage Agreement for Public-Sector Employees. Remote work/home office is possible according to institutional policy.
Deadline
Sep 15, 2026
Country
Germany
University
Helmholtz Zentrum München Deutsches Forschungszentrum für Umwelt und Gesundheit

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About this position
Research Scientist (f/m/x) in Spatial Multi-Omics Analysis at Helmholtz Zentrum München - Deutsches Forschungszentrum für Gesundheit und Umwelt in Neuherberg near Munich, Germany.
This is a research scientist / postdoctoral-style position embedded in the Core Facility Bioinformatics and Statistics (CF-BIOS) and linked to the SPACETIME EU consortium. The role focuses on the analysis of spatial transcriptomics and multi-omics data generated in the context of non-small cell lung carcinoma, with strong emphasis on reproducible workflows, metadata management, data accessibility, visualization, and training.
Key work includes data management and validation, building reproducible analysis playbooks, supporting spatial analyses across the consortium, and designing AI-driven tools and applications for data dissemination and exploration. The position also involves documentation, reusable workflow development, and user training in a collaborative bioinformatics environment.
Applicants should have a Master or PhD in informatics, bioinformatics, engineering, or a related field, with corresponding work experience. Strong skills in R, Python, Bash, Git are required, along with experience in next-generation sequencing, especially single-cell and spatial/multi-omics analysis, plus data management and HPC. English proficiency and strong communication/team skills are expected.
The position is full time (39 hrs/week, or part-time minimum 70%), fixed term for 2 years, and may be graded up to E 13 under TVöD. Benefits include access to cutting-edge datasets, collaboration with leading researchers, a dynamic interdisciplinary team, and possible home office according to policy.
Deadline: 2026-09-15.
How to apply: Submit your application via the online tool only, including CV, cover letter, and contact details for at least two referees. If you earned your degree abroad, prepare the comparability documents as early as possible.
Funding details
Full-time fixed-term position for 2 years at Helmholtz Munich. Salary may be up to E 13 under TVöD if all requirements are met. Social benefits are based on the Collective Wage Agreement for Public-Sector Employees. Remote work/home office is possible according to institutional policy.
What's required
Master or PhD in informatics, bioinformatics, engineering, or a related field with corresponding work experience. Strong programming skills in R, Python, Bash, and Git version control are required. Applicants should have demonstrable experience analyzing next-generation sequencing data, especially single-cell sequencing and spatial/multi-omics technologies, plus experience with data management, metadata annotation, and high-performance computing environments. English language proficiency, teamwork, proactive attitude, service mindset, and strong communication skills are required; Linux server/storage administration, multi-user software deployment, complex spatial biology analyses, and training/material development are desirable.
How to apply
Apply only through the online application tool. Submit a CV, cover letter, and contact details for at least two referees. If your degree was obtained abroad, prepare comparability documents by the start date at the latest.
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