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Diogo Pratas

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Universidade de Aveiro

Portugal

Research Interests

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Professors in Portugal Professors in Microbiology Microbiology professors in Portugal

Recent Grants

Grant: Open

The Human Tissue Virome - Comprehensive Impact Analysis #5

Open Date: 2024-01-01

Close Date: 2028-01-01

Grant: Close

The Human Tissue Virome - Comprehensive Impact Analysis #4

Open Date: 2023-01-01

Close Date: 2024-01-01

Grant: Close

Laboratório Associado de Sistemas Inteligentes

Open Date: 2021-01-01

Close Date: 2025-12-01

Grant: Close

Intelligent Reconstruction and Analysis of Ancient Genomes

Open Date: 2019-01-01

Close Date: 2024-01-01

Grant: Close

Institute of Electronics and Informatics Engineering of Aveiro

Open Date: 2019-01-01

Close Date: 2019-12-31

Articles (18)

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2026

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2026

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2026

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2026

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2025

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2025

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2024

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2023

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2023

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2023

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2023

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2022

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2022

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2022

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2022

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2021

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2021

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2021

Collaborators (17)

Filipe Pereira

Assistant Professor

Universidade de Trás-os-Montes e Alto Douro

PORTUGAL

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Miguel Semedo

Researcher

University of Porto

PORTUGAL

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M. Fátima Carvalho

Invited Assistant Professor

ICBAS, University of Porto

PORTUGAL

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Sérgio F. Sousa

Professor Auxiliar

University of Coimbra

PORTUGAL

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Antti Sajantila

University of Helsinki

FINLAND

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Sérgio Matos

Associate Professor

Universidade de Aveiro

PORTUGAL

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Catarina Magalhães

Invited Professor

University of Porto

PORTUGAL

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Tânia S. Caetano

Assistant Researcher

Universidade de Aveiro

PORTUGAL

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Mari Toppinen

University of Helsinki

FINLAND

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Maria Fernanda Perdomo

University of Helsinki

FINLAND

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Ushanandini Mohanraj

University of Helsinki

FINLAND

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Lari Pyöriä

University of Helsinki

FINLAND

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Manuel Simões

Associate Professor with Habilitation

Universidade do Porto Faculdade de Engenharia

PORTUGAL

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Armando J. Pinho

Universidade de Aveiro

PORTUGAL

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Leo Hannolainen

University of Helsinki

FINLAND

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Timo Jahnukainen

University of Helsinki

FINLAND

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Modra Murovska

Director

Riga Stradiņš University

LATVIA

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Diogo Pratas

Research Interests

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Recent Grants

Articles (18)

An evaluation of computational methods for reconstruction of human viral DNA genomes

FALCON2: compression-based metagenomic classification of ancient viruses

A Machine Learning Method for Authentication of Human Ancient Mitochondrial DNA

ECOmpress: A Web Tool for Boosting Energy Efficiency Through Data Compression

AIDetx

Optimization of data compression parameters using genetic algorithms

Reactivation of a Transplant Recipient's Inherited Human Herpesvirus 6 and Implications to the Graft

Unmasking the tissue-resident eukaryotic DNA virome in humans

Herpesviruses, polyomaviruses, parvoviruses, papillomaviruses, and anelloviruses in vestibular schwannoma

TargIDe: a machine-learning workflow for target identification of molecules with antibiofilm activity against Pseudomonas aeruginosa

Mapping human pathogens in wastewater using a metatranscriptomic approach

Detection of Low-Copy Human Virus DNA upon Prolonged Formalin Fixation

The complexity landscape of viral genomes

AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data

The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features

The Human Bone Marrow Is Host to the DNAs of Several Viruses

Revisiting the Neurospora crassa mitochondrial genome

AC2: An Efficient Protein Sequence Compression Tool Using Artificial Neural Networks and Cache-Hash Models

Collaborators (17)

Filipe Pereira

Miguel Semedo

M. Fátima Carvalho

Sérgio F. Sousa

Antti Sajantila

Sérgio Matos

Catarina Magalhães

Tânia S. Caetano

Mari Toppinen

Maria Fernanda Perdomo

Ushanandini Mohanraj

Lari Pyöriä

Manuel Simões

Armando J. Pinho

Leo Hannolainen

Timo Jahnukainen

Modra Murovska

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