Postdoc in genomics and plant transposable elements at Umeå University
Postdoctoral position in genomics with focus on plant transposable elements at Umeå University, Sweden.
This opening is for a
2-year postdoc
in the
Umeå Plant Science Centre (UPSC)
at
Umeå University
, working in Professor
Nathaniel R. Street
’s team on the
Con-TEki
project. The project studies how
transposable elements
drive regulatory innovation in conifers, especially
Norway spruce
and
Scots pine
, with comparisons to
aspen
.
The research is highly interdisciplinary and combines
genomics
,
epigenomics
,
3D chromatin
profiling, enhancer assays, comparative genomics, Bayesian analysis, and machine learning/deep learning. Methods mentioned include
ATAC-Seq
,
easySHARE-Seq
,
ChIP-Seq
,
Micro-C/Hi-C
,
BS-Seq/EM-Seq
,
ATAC-STARR-seq
, TE-derived cis-regulatory element analysis, enhancer–promoter linking, and functional validation in spruce.
The postdoc will work closely with
Torgeir R. Hvidsten
(NMBU, Norway) and will have access to a collaborative environment through
SciLifeLab
and
IceLab
. The role includes building reproducible computational workflows, analyzing multi-omic datasets, leading manuscript preparation, presenting results, and mentoring PhD students.
Eligibility highlights:
a PhD in plant molecular biology, genomics/bioinformatics, systems genetics, or a closely related field; expertise in at least two relevant areas such as high-throughput sequencing analysis, chromatin conformation analysis, or computational genomics; strong publication record; and excellent English scientific communication. Experience with TE annotation, WGD/segmental duplication analyses, motif inference, MPRA-style assays, drought stress, wood development, or tree systems is considered meritorious.
Funding and terms:
full-time, temporary employment for
two years
. No stipend amount is stated. This is a salaried postdoctoral employment rather than a scholarship.
Application deadline:
2026-06-06
. Applications must be submitted through Umeå University’s recruitment system
Varbi
. Required documents include a CV, publication list, cover letter, referee contacts, and proof of PhD award or expected award date.