Publisher
source

University of St Andrews

PhD in Gut Microbiome, Animal Welfare, and Resilience in African Guinea Fowl University of St Andrews in United Kingdom

Degree Level

PhD

Field of study

Computer Science

Funding

This is a 4-year competition-funded PhD project through the EASTBIO BBSRC Doctoral Training Partnership. It provides a stipend at the UKRI standard rate and covers UK-level tuition fees; the University of St Andrews will cover the Home-International fee difference. Open to UK and international students.

Deadline

Nov 16, 2026

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Country

United Kingdom

University

University of St Andrews

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Keywords

Computer Science
Environmental Science
Agriculture
Biology
Nutrition
Sustainable Agriculture
Animal Welfare
Gut Microbiota
Host-pathogen Interaction
User Behavior
Statistics
Statistical Modelling

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About this position

PhD opportunity at the University of St Andrews in the School of Psychology and Neuroscience, within the EASTBIO/BBSRC Doctoral Training Partnership.

This project is titled “Mapping the gut microbiome of an understudied poultry species: environmental and nutritional drivers of resilience in African Guinea fowl.” It sits at the intersection of biology, agriculture, microbiology, bioinformatics, environmental science, and statistics, with a strong focus on host–microbe interactions, animal welfare, resilience biology, and sustainable agriculture.

The research will generate the first microbiome map of guinea fowl and investigate how environmental conditions, ecotype variation, and nutrition shape gut microbial communities. The student will work across contrasting ecological and management contexts, with fieldwork in Burkina Faso alongside microbial expert Edwige Somé. Welfare and health assessments, behavioural measures, and experimental work will be carried out at the University of St Andrews, while microbiome sequencing will be conducted externally and analysed with bioinformatics support from Laura Glendinning and Jacqueline Smith at the Roslin Institute.

Training includes experimental design, animal welfare and behaviour, health assessment, microbiome bioinformatics, host–microbe interaction biology, and statistical modelling. The project also offers practical field experience, including sample collection and farmer engagement in real production systems.

Funding: 4 years, competition-funded, stipend at UKRI standard rate, UK tuition fees covered, and the Home-International fee difference covered by the university. Open to UK and international students.

How to apply: Complete the EASTBIO EDI survey and application form, then submit an online application via the University of St Andrews portal. Select PhD with internship and include the required documents and two references. Queries about the project should go to the supervisors; application queries go to Rachel Horn at [email protected].

Funding details

This is a 4-year competition-funded PhD project through the EASTBIO BBSRC Doctoral Training Partnership. It provides a stipend at the UKRI standard rate and covers UK-level tuition fees; the University of St Andrews will cover the Home-International fee difference. Open to UK and international students.

What's required

Applicants should be interested in host–microbe interactions, animal welfare, resilience biology, sustainable agriculture, microbiome bioinformatics, and working across field, laboratory, and computational environments. The project welcomes a wide range of applicants, including those from under-represented groups. English language qualification is required if applicable, and two references plus academic qualifications must be submitted.

How to apply

Download and complete the EASTBIO Equality, Diversity and Inclusion survey and EASTBIO Application Form. Submit an online application through the University of St Andrews portal and select the course 'PhD with internship'. Include the EASTBIO application form, academic qualifications, English language qualification if applicable, and two references on the EASTBIO reference form.

More information can be found here

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