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Charlotte Bunne

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Assistant Professor in Computer Science and Life Sciences

École Polytechnique Fédérale de Lausanne
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Switzerland

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Charlotte Bunne

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École Polytechnique Fédérale de Lausanne

PhD, Postdoc, and Master's Opportunities in Multimodal AI for Biology and Medicine at EPFL

The AIMM Lab at the École Polytechnique Fédérale de Lausanne (EPFL) is recruiting three PhD students, as well as postdoctoral scholars and master's students, to join cutting-edge research in multimodal AI systems for biology and medicine. The lab, led by Assistant Professor Charlotte Bunne, is affiliated with the EPFL AI Center and focuses on developing new vision-language and diffusion models, agent frameworks, and multimodal architectures to advance computational biology and biomedicine. PhD candidates are encouraged to apply through the Doctoral Program in Computer and Communication Sciences (EDIC) or, for computational biology, the EDCB Doctoral School. Applicants should have a strong background in machine learning, computer science, computational biology, or biomedicine, and demonstrate motivation for research in AI-driven biomedical applications. Postdoctoral applicants should have a strong publication record in relevant conferences and journals and should contact the lab directly via email with their CV, publication list, references, and a cover letter. Master's students interested in thesis or internship projects can apply for available projects in generative AI for therapy planning, large-scale biological imaging, vision-language models for biomedicine, and reasoning in biological foundation models. Undergraduate students may apply for short-term research visits through the Summer@EPFL program. EPFL doctoral programs are typically fully funded, though specific stipend and tuition details are not provided. Application deadlines for the EDIC program are December 15 and April 15, and for the EDCB program are April 15 and November 1. For more information and to apply, visit the AIMM Lab openings page or the EPFL doctoral school websites.

1 year ago

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Charlotte Bunne

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École Polytechnique Fédérale de Lausanne

Postdoctoral Positions in Biological Foundation Models and Generative AI at EPFL

EPFL’s AIMM Lab (Artificial Intelligence in Molecular Medicine), led by Charlotte Bunne, is recruiting postdoctoral researchers for two related openings at the intersection of computer science , biology , and medical science . The first role is in biological foundation models for candidates with strong experience in large-scale AI development and a biological background. The work focuses on building foundation models for biological data, multimodal learning, and translational applications. The second role is in generative AI and foundation model methods for candidates with a strong machine learning background, especially in diffusion models, generative transformers, scalable training, or related areas. Prior experience with biological data is not required for this position. The lab is part of EPFL in Lausanne, Switzerland, and is connected to the EPFL School of Computer Science, the Swiss Institute for Experimental Cancer Research, and the EPFL AI Center. The positions include dedicated access to CSCS and the Swiss AI Initiative, and offer the chance to work on AI for personalized medicine, digital diagnostics, and scientific discovery. Applications are reviewed on a rolling basis . Interested candidates should use the EPFL careers pages for the relevant opening and consult the AIMM Lab website for more information about the group and its research.

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Charlotte Bunne

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École Polytechnique Fédérale de Lausanne

Postdoctoral Position in Frontier Artificial Intelligence Research at EPFL

EPFL’s Artificial Intelligence in Molecular Medicine (AIMM) Lab is recruiting a postdoctoral researcher for frontier research in generative AI and foundation models . The lab is led by Prof. Charlotte Bunne and is affiliated with the School of Computer and Communication Sciences, the School of Life Sciences, and the EPFL AI Center. The position is highly methodological and focuses on developing new generative modeling approaches, scalable training algorithms, and foundation model technologies. Research directions include diffusion models, flow matching, autoregressive models, normalizing flows, multimodal learning, scalable fine-tuning, evaluation, deployment, and AI for scientific discovery. The post comes with dedicated access to the Swiss National Supercomputing Centre and the Swiss AI Initiative, and offers opportunities for collaboration across AI, science, and industry. Applicants should have a PhD in machine learning, computer science, applied mathematics, statistics, physics, engineering, or a closely related field, completed or near completion. The ideal candidate will have strong expertise in generative AI, strong programming skills, experience with modern deep learning frameworks, experience with large-scale or distributed training, and a strong publication record. Prior experience with biological or biomedical data is not required. The role is a full-time postdoc (activity rate 100%) with a competitive EPFL salary and full social benefits. Applications are reviewed on a rolling basis. To apply, send a CV, a brief 1-page statement of research interests, and the names of two references. More information is available at aimm.epfl.ch .

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Charlotte Bunne

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École Polytechnique Fédérale de Lausanne

2 Postdoctoral Positions in Biological Foundation Models at EPFL

EPFL (École Polytechnique Fédérale de Lausanne) is advertising 2 PostDoc positions in the Artificial Intelligence in Molecular Medicine (AIMM) Lab , led by Prof. Charlotte Bunne . The lab works at the intersection of computer science , biology , and molecular medicine , with affiliation to the School of Computer and Communication Sciences, the School of Life Sciences, and the EPFL AI Center. The positions focus on biological foundation models and cover the full stack of research: foundation model architecture development , novel pretraining objectives, tokenization, scalable architectures for biological data, multimodal learning across biological data modalities, agentic interfaces for reasoning and decision support, and translational applications in early drug discovery and biomedical sciences. Applicants should have a PhD in machine learning, computer science, computational biology, or a closely related field (completed or near completion). The post also asks for strong experience in large-scale AI development, a solid biological background, familiarity with biological data modalities, a strong publication record, and excellent communication skills for interdisciplinary research. Funding includes a competitive EPFL postdoc salary , full social benefits , dedicated compute access via the Swiss National Supercomputing Centre (CSCS) and the Swiss AI Initiative , and collaboration with pharmaceutical industry partners. The activity rate is 100% . Applications are reviewed on a rolling basis . To apply, send a CV , a 1-page statement of research interests , and the names of two references . More information is available at the AIMM lab website.

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