Ira Cooke
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Associate Professor
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About
Dr. Ira Cooke is an Associate Professor at James Cook University in Australia. His research focuses on genomic variation in marine organisms, chromosomal inversions in corals, and bioremediation in marine environments. Recent publications include work on the genomic evidence of the West Antarctic Ice Sheet collapse and the role of microbiome manipulation in corals. His interdisciplinary approach aims to enhance the understanding of marine ecosystems and their management.
Recent Grants
Grant: Close
ARC Research Hub for Supercharging Tropical Aquaculture Through Genetic Solutions
Open Date: 2021-01-01
Close Date: 2025-12-31
Grant: Close
Coral resilience and the optimal management of biodiversity
Open Date: 2017-01-01
Close Date: 2019-12-31
Positions (1)
Jan Strugnell
James Cook University
4 months ago
James Cook University in Australia is advertising a PhD project and a Masters project in marine biology, aquaculture, genomics, and molecular ecology. PhD project: Does structural variation underpin adaptation in Antarctic marine invertebrates? This project focuses on structural genomic variants (SVs), adaptive evolution, speciation, conservation genetics, and genome rearrangement in Antarctic marine invertebrates. It may include Antarctic fieldwork and will build on existing data from Antarctica. The project is especially relevant to students interested in marine genomics, bioinformatics, evolutionary biology, and biodiversity under environmental change. PhD eligibility: Applicants should have a First Class Honours degree or equivalent in biological science or a related field. Experience in genetics, genomics, or bioinformatics is preferred. Publications are desirable but not essential. The PhD is scheduled to commence in 2026, and applications close on 22 June. Funding: The PhD provides $36,500 per year for 3.5 years (tax exempt), with field and laboratory expenses supported by the broader project. How to apply: Send a CV, academic transcript, and a short letter of suitability and interest to Prof. Jan Strugnell and Assoc. Prof. Ira Cooke by email. Masters project: Southern range limit of the tropical Black-lip rock oyster; an emerging aquaculture species . This project examines the distribution and southern range limit of Saccostrea echinata using species-specific assays, environmental DNA (eDNA), metabarcoding, fieldwork, laboratory work, and molecular genetic analyses. It is a collaboration between the Department of Agriculture and Fisheries, Queensland, and James Cook University. Masters supervision: Dr Max Wingfield (Department of Agriculture and Fisheries, Queensland) and Prof. Jan Strugnell (James Cook University). Contact: Interested applicants for either project can contact Jan Strugnell at [email protected].
4 months ago
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Collaborators (21)
Tim Naish
Professor & Programme Leader Our Changing Coast
Victoria University of Wellington
Przemysław Gagat
Assistant professor/PhD
University of Wrocław
David J Miller
James Cook University
Patrick Schaeffer
Associate Professor
James Cook University
Jarrod Guppy
James Cook University
Rafał Kolenda
Wroclaw University of Environmental and Life Sciences
Nicholas Golledge
Associate Professor
Victoria University of Wellington
Laurence Dugal
University of Western Australia
Louise Allcock
Lecturer
National University of Ireland Galway
Rozita Takjoo
Teaching Assistant
James Cook University
Felix Mark
Alfred-Wegener-Institut für Polar und Meeresforschung
Jan Strugnell
Professor
James Cook University
Camille Grimaldi
Australian Institute of Marine Science
Cheong Xin Chan
University of Queensland
Nerida Wilson
University of Western Australia
Sophie G. Dove
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Roy Barkan
Teaching assistant
James Cook University
Sue-Ann Watson
-
Cynthia Riginos
Professor
University of Queensland
Phillip Watts
Professor
University of Jyväskylä
Katrin Linse
British Antarctic Survey
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