Ira Cooke

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Associate Professor

James Cook University
Country flagAustralia

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About

Dr. Ira Cooke is an Associate Professor at James Cook University in Australia. His research focuses on genomic variation in marine organisms, chromosomal inversions in corals, and bioremediation in marine environments. Recent publications include work on the genomic evidence of the West Antarctic Ice Sheet collapse and the role of microbiome manipulation in corals. His interdisciplinary approach aims to enhance the understanding of marine ecosystems and their management.

Recent Grants

Grant: Close

ARC Research Hub for Supercharging Tropical Aquaculture Through Genetic Solutions

Open Date: 2021-01-01

Close Date: 2025-12-31

Grant: Close

Coral resilience and the optimal management of biodiversity

Open Date: 2017-01-01

Close Date: 2019-12-31

Positions (1)

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Jan Strugnell

University Name
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James Cook University

James Cook University in Australia is advertising a PhD project and a Masters project in marine biology, aquaculture, genomics, and molecular ecology. PhD project: Does structural variation underpin adaptation in Antarctic marine invertebrates? This project focuses on structural genomic variants (SVs), adaptive evolution, speciation, conservation genetics, and genome rearrangement in Antarctic marine invertebrates. It may include Antarctic fieldwork and will build on existing data from Antarctica. The project is especially relevant to students interested in marine genomics, bioinformatics, evolutionary biology, and biodiversity under environmental change. PhD eligibility: Applicants should have a First Class Honours degree or equivalent in biological science or a related field. Experience in genetics, genomics, or bioinformatics is preferred. Publications are desirable but not essential. The PhD is scheduled to commence in 2026, and applications close on 22 June. Funding: The PhD provides $36,500 per year for 3.5 years (tax exempt), with field and laboratory expenses supported by the broader project. How to apply: Send a CV, academic transcript, and a short letter of suitability and interest to Prof. Jan Strugnell and Assoc. Prof. Ira Cooke by email. Masters project: Southern range limit of the tropical Black-lip rock oyster; an emerging aquaculture species . This project examines the distribution and southern range limit of Saccostrea echinata using species-specific assays, environmental DNA (eDNA), metabarcoding, fieldwork, laboratory work, and molecular genetic analyses. It is a collaboration between the Department of Agriculture and Fisheries, Queensland, and James Cook University. Masters supervision: Dr Max Wingfield (Department of Agriculture and Fisheries, Queensland) and Prof. Jan Strugnell (James Cook University). Contact: Interested applicants for either project can contact Jan Strugnell at [email protected].

4 months ago

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Collaborators (21)

Tim Naish

Professor & Programme Leader Our Changing Coast

Victoria University of Wellington

NEW ZEALAND
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Przemysław Gagat

Assistant professor/PhD

University of Wrocław

POLAND
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David J Miller

James Cook University

AUSTRALIA
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Patrick Schaeffer

Associate Professor

James Cook University

AUSTRALIA
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Jarrod Guppy

James Cook University

AUSTRALIA
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Rafał Kolenda

Wroclaw University of Environmental and Life Sciences

POLAND
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Nicholas Golledge

Associate Professor

Victoria University of Wellington

NEW ZEALAND
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Laurence Dugal

University of Western Australia

AUSTRALIA
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Louise Allcock

Lecturer

National University of Ireland Galway

IRELAND
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Rozita Takjoo

Teaching Assistant

James Cook University

AUSTRALIA
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Felix Mark

Alfred-Wegener-Institut für Polar und Meeresforschung

GERMANY
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Jan Strugnell

Professor

James Cook University

AUSTRALIA
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Camille Grimaldi

Australian Institute of Marine Science

AUSTRALIA
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Cheong Xin Chan

University of Queensland

AUSTRALIA
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Nerida Wilson

University of Western Australia

AUSTRALIA
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Sophie G. Dove

-

AUSTRALIA
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Roy Barkan

Teaching assistant

James Cook University

AUSTRALIA
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Sue-Ann Watson

-

AUSTRALIA
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Cynthia Riginos

Professor

University of Queensland

AUSTRALIA
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Phillip Watts

Professor

University of Jyväskylä

FINLAND
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Katrin Linse

British Antarctic Survey

UNITED KINGDOM
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