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Karolinska Institutet

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PhD Position in Epigenetics, Bioinformatics and Neuroimmunology Karolinska Institutet in Sweden

Degree Level

PhD

Field of study

Computer Science

Funding

Doctoral studentship at Karolinska Institutet for up to 4 years full-time, with a contractual monthly salary and salary scale for doctoral students. The post is a paid PhD placement rather than an unfunded position.

Deadline

Oct 15, 2026

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Country

Sweden

University

Karolinska Institutet

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Keywords

Computer Science
Biomarker Research
Biomedical Engineering
Biology
Computational Biology
Precision Medicine
Single-cell Analysis
Neuropsychology
Medical Science
Epigenetic
Statistics
Bioinformatic
Psychoneuroimmunology

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About this position

Karolinska Institutet is advertising a doctoral (PhD) student position in epigenetics, bioinformatics, and neuroimmunology within the Department of Clinical Neuroscience in Stockholm, Sweden.

The project is led by Professor Maja Jagodic and is embedded in the Karolinska Neuroimmunology and Multiple Sclerosis (KNIMS) network. The research focuses on using cell-free DNA (cfDNA) to study molecular processes associated with neurological conditions, combining access to unique clinical cohorts with state-of-the-art molecular and computational approaches. The work aims to improve understanding of disease mechanisms and support novel biomarker strategies in precision medicine.

The supervisory team includes Dr. Maria Needhamsen (main supervisor), Dr. Narsis Kiani, Prof. Fang Fang, and Prof. Maja Jagodic, bringing expertise in bioinformatics, computational biology, epigenetics, neuroimmunology, and epidemiology.

The PhD student will contribute to experimental and computational work, including generation of high-throughput sequencing data, development and implementation of computational/statistical analyses, scientific writing, presentations, and dissemination. The position also includes postgraduate courses and participation in graduate-school activities.

Eligibility requires a master’s degree or equivalent for doctoral education and English proficiency equivalent to English B/English 6. Preferred backgrounds include bioinformatics, computational biology, molecular biology, biomedicine, or related fields. Strong R/Python programming, Linux, HPC, and experience with DNA methylation or single-cell RNA-seq analysis are advantageous.

This is a paid doctoral studentship for up to 4 years full-time, with a contractual monthly salary. Applications must be submitted via the Varbi recruitment system by 2026-10-15.

Funding details

Doctoral studentship at Karolinska Institutet for up to 4 years full-time, with a contractual monthly salary and salary scale for doctoral students. The post is a paid PhD placement rather than an unfunded position.

What's required

Applicants must have a master’s degree or equivalent qualification meeting Swedish doctoral eligibility requirements, and must demonstrate proficiency in English equivalent to English B/English 6. A master’s degree in bioinformatics, computational biology, molecular biology, biomedicine, or a related field is preferred. Strong programming skills in R and/or Python, experience in Linux-based environments, and familiarity with high-performance computing are meritorious. Experience with high-throughput DNA methylation or single-cell RNA-seq analysis, including processing, statistical analysis, integration, and visualization, is an advantage. Machine learning, cell-type deconvolution, and cfDNA-based approaches are additional assets. Strong interpersonal and communication skills, teamwork, responsibility, flexibility, independence, and suitability for interdisciplinary/international research are valued.

How to apply

Apply through the Varbi recruitment system using the application button on the job page. Submit a personal letter, CV, degree projects and publications if any, other evidence of relevant skills, and documents proving general and specific eligibility. Applications may be written in English or Swedish.

More information can be found here

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