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Alena Khmelinskaia
Research Interests
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Articles (3)
Year:
2025
Year:
2025
Self‐assembling polyhedral protein biomaterials have gained attention as engineering targets owing to their naturally evolved sophisticated functions, ranging from protecting macromolecules from the environment to spatially controlling biochemical reactions. Precise computational design of de novo protein polyhedra is possible through two main types of approaches: methods from first principles, using physical and geometrical rules, and more recent data‐driven methods based on artificial intelligence (AI), including deep learning (DL). Here, we retrospect first principle‐ and AI‐based approaches for designing finite polyhedral protein assemblies, as well as advances in the structure prediction of such assemblies. We further highlight the possible applications of these materials and explore how the presented approaches can be combined to overcome current challenges and to advance the design of functional protein‐based biomaterials.
Year:
2023
Collaborators (4)
Neil P. King
University of Washington
Kathrin Leppek
University of Bonn
Maria Barna
Stanford University School of Medicine
Andrew Borst
Senior Scientist & Head of Electron Microscopy
University of Washington
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