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Andres Espindola

Assistant Professor

Oklahoma State University

United States

Research Interests

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About

Andres Espindola is an Assistant Professor at Oklahoma State University in the United States. His research focuses on pathogen detection and the application of innovative tools in meta-transcriptomic data analysis, as highlighted in his recent articles. His work includes the validation of viral e-probes and advancements in bioinformatic pipelines for plant virus diagnostics.

Articles (16)

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2026

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Collaborators (11)

Sushim Kumar Gupta

Clinical Assistant Professor

Oklahoma State University

UNITED STATES

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Georgios Vidalakis

Professor-Cooperative Extension-Director

University of California

UNITED STATES

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Darren Hagen

Associate Professor

Oklahoma State University Stillwater

UNITED STATES

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Heiko Ziebell

Julius Kühn-Institut Bundesforschungsinstitut für Kulturpflanzen

GERMANY

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Daniele Maria Nascimento

Oklahoma State University

UNITED STATES

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Francisco Flores

Adjunct Professor

Oklahoma State University Stillwater

UNITED STATES

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Marcos Roberto Ribeiro-Junior

Oklahoma State University

UNITED STATES

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Joshua Habiger

Oklahoma State University

UNITED STATES

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Francisco Ochoa-Corona

Professor

Oklahoma State University Stillwater

UNITED STATES

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Maira Rodrigues Duffeck

Oklahoma State University

UNITED STATES

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Akhtar Ali

Professor of Virology

University of Tulsa

UNITED STATES

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Andres Espindola

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Articles (16)

Rapid detection of human and animal respiratory viruses using Microbe Finder (MiFi®)

First Report of a 16Srl-B Phytoplasma (‘Candidatus Phytoplasma Asteris’) Associated to Maize Bushy Stunt in Oklahoma

First Report of Capsicum Chlorosis Virus Infecting Zinnia in the Continental United States

Hybridization capture increases on-target nanopore sequencing of plant RNA tobamovirus- derived cDNA libraries

Rhizosphere-mediated effects on winter wheat yield in Oklahoma and the development of diagnostic probes targeting beneficial microorganisms

Highly Curated and Reliable E-Probes for Detection of Viral Pathogens in Unassembled High-Throughput Sequencing Datasets from Hops

Detection and In Vivo Validation of <i>Dichorhavirus</i> e-Probes in Meta-Transcriptomic Data via Microbe Finder (MiFi<sup>®</sup>) Discovers a Novel Host and a Possible New Strain of Orchid Fleck Virus

Assessment of Viral Limit of Detection in Spiked, Unassembled High-Throughput Sequencing Datasets

An Attempt Toward the Global Screening of Soybean Viruses Using EDNA-MiFi-Based Electronic Probes

Development and Validation of a Suite of E-Probes for Electronic Diagnostic Nucleic Acid Analysis (EDNA) for 20 Graft-Transmissible Pathogens of Citrus Using MiFi and Blind Ring Testing Among Novice Users

MeStanG—Resource for High-Throughput Sequencing Standard Data Sets Generation for Bioinformatic Methods Evaluation and Validation

Integrating In Silico and In Vitro Approaches for Detecting Coniothyrium glycines in High-Throughput Sequencing (HTS) Datasets Using EDNA-MiFi

First Report of <i>Dalbulus maidis</i> (DeLong and Wolcott) (Hemiptera: Cicadellidae) in Oklahoma

Simulated High Throughput Sequencing Datasets: A Crucial Tool for Validating Bioinformatic Pathogen Detection Pipelines

TASPERT: Target-Specific Reverse Transcript Pools to Improve HTS Plant Virus Diagnostics

Microbe Finder (MiFi<sup>®</sup>): Implementation of an Interactive Pathogen Detection Tool in Metagenomic Sequence Data

Collaborators (11)

Sushim Kumar Gupta

Georgios Vidalakis

Darren Hagen

Heiko Ziebell

Daniele Maria Nascimento

Francisco Flores

Marcos Roberto Ribeiro-Junior

Joshua Habiger

Francisco Ochoa-Corona

Maira Rodrigues Duffeck

Akhtar Ali

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