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Anne Carpenter

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Institute Scientist and Senior Director

Broad Institute

United States

Research Interests

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Recent Grants

Grant: Close

Rapidly Identifying Drugs for Rare Disorders by Pooled Image-Based Profiling

Open Date: 2024-01-01

Close Date: 2025-01-01

Grant: Close

DARTS: Defeating Antibiotic Resistance through Transformative Solutions

Open Date: 2023-01-01

Close Date: 2025-01-01

Grant: Close

Molecular phenotyping of ~100,000 coding variants across Mendelian disease genes

Open Date: 2021-01-01

Close Date:

Grant: Close

Accelerating drug discovery via the Joint Undertaking for Morphological Profiling with Cell Painting (JUMP-CP)”

Open Date: 2019-01-01

Close Date: 2021-01-01

Grant: Close

Center for Open Bioimage Analysis

Open Date: 2019-01-01

Close Date: 2024-01-01

Articles (20)

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Collaborators (8)

Gregory Way

Associate Professor

University of Colorado Anschutz Medical Campus

UNITED STATES

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Jessica Ewald

Group Leader

European Bioinformatics Institute

UNITED KINGDOM

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Andreas Bender

Professor for Machine Learning in Medicine

University of Cambridge

UNITED KINGDOM

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Shantanu Singh

Broad Institute

UNITED STATES

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Beth Cimini

Associate Director, Bioimage Analysis

Broad Institute

UNITED STATES

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Ola Spjuth

Professor

Uppsala University

SWEDEN

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Bartek Rajwa

Purdue University

UNITED STATES

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Loan Vulliard

Deutsches Krebsforschungszentrum

GERMANY

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ApplyKite TwinLearns as you apply

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Anne Carpenter

Research Interests

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Recent Grants

Articles (20)

Live-cell painting: Image-based profiling in live cells using acridine orange

Author Correction: Cell Painting: a decade of discovery and innovation in cellular imaging

Cell Painting: a decade of discovery and innovation in cellular imaging

A genome-wide atlas of human cell morphology

A versatile information retrieval framework for evaluating profile strength and similarity

Reproducible image-based profiling with Pycytominer

Alternate dyes for image-based profiling assays

Cell Painting for cytotoxicity and mode-of-action analysis in primary human hepatocytes

nELISA: A high-throughput, high-plex platform enables quantitative profiling of the inflammatory secretome

From pixels to phenotypes: Integrating image-based profiling with cell health data as BioMorph features improves interpretability

Capturing cell heterogeneity in representations of cell populations for image-based profiling using contrastive learning

Cell Painting Gallery: an open resource for image-based profiling

Evaluating batch correction methods for image-based cell profiling

Bringing computation to biology by bridging the last mile

A postdoctoral training program in bioimage analysis

Improved Detection of Drug-Induced Liver Injury by Integrating Predicted In Vivo and In Vitro Data

Insights into Drug Cardiotoxicity from Biological and Chemical Data: The First Public Classifiers for FDA Drug-Induced Cardiotoxicity Rank

Learning representations for image-based profiling of perturbations.

A Decade in a Systematic Review: The Evolution and Impact of Cell Painting

Cell morphological representations of genes enhance prediction of drug targets

Collaborators (8)

Gregory Way

Jessica Ewald

Andreas Bender

Shantanu Singh

Beth Cimini

Ola Spjuth

Bartek Rajwa

Loan Vulliard

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