Anneleen Decock
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Recent Grants
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The biology of tumor-derived extracellular RNA in liquid biopsies
Open Date: 2020-11-01
Close Date: 2023-10-01
Grant: Close
Circulating tumor-derived RNA biomarkers: from bench to bedside
Open Date: 2017-10-01
Close Date: 2020-09-01
Grant: Close
Exploring the neuroblastoma DNA methylome: identifying differences between biologically distinct patient groups and establishing biomarker detection in plasma samples
Open Date: 2015-10-01
Close Date: 2016-09-01
Grant: Close
Improved outcome prediction of children with neuroblastoma using an integrated m/miRNA and DNA methylation signature.
Open Date: 2013-02-01
Close Date: 2017-06-01
Grant: Close
Epigenetic biomarkers for prognosis in children with neuroblastoma
Open Date: 2011-10-01
Close Date: 2015-10-01
Articles (10)
Extracellular RNA (cell‐free RNA; exRNA) from blood‐derived liquid biopsies is an appealing, minimally invasive source of disease biomarkers. As pre‐analytical variables strongly influence exRNA measurements, their reporting is essential for meaningful interpretation and replication of results. The aim of this review was to chart to what extent pre‐analytical variables are documented, to pinpoint shortcomings and to improve future reporting. In total, 200 blood plasma exRNA studies published in 2018 or 2023 were reviewed for annotation of 22 variables associated with blood collection, plasma preparation, and RNA purification. Our results show that pre‐analytical variables are poorly documented, with only three out of 22 variables described in over half of the publications. The percentage of variables reported ranged from 4.6% to 54.6% (mean 24.84%) in 2023 and from 4.6% to 57.1% (mean 28.60%) in 2018. Recommendations and guidelines (i.e., BRISQ, ASCO‐CAP, BloodPAC, PPMPT, and CEN standards) have currently not resulted in improved reporting. In conclusion, our results highlight the lack of reporting pre‐analytical variables in exRNA studies and advocate for a consistent use of available standards, endorsed by funders and journals.
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2024
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2023
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2022
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2022
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2022
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2022
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2021
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2021
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2020
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2020
Collaborators (7)
Cláudio Alexandre Almeida Pinheiro
Ghent University
Pekka Rappu
University lecturer
University of Turku
Pieter Mestdagh
Ghent University
Johanna Bult
University Medical Center Groningen
Jo Vandesompele
co-founder and Chief Scientific Officer
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David Creytens
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Celine Everaert
Ghent University
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