Anneleen Decock

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Recent Grants

Grant: Close

The biology of tumor-derived extracellular RNA in liquid biopsies

Open Date: 2020-11-01

Close Date: 2023-10-01

Grant: Close

Circulating tumor-derived RNA biomarkers: from bench to bedside

Open Date: 2017-10-01

Close Date: 2020-09-01

Grant: Close

Exploring the neuroblastoma DNA methylome: identifying differences between biologically distinct patient groups and establishing biomarker detection in plasma samples

Open Date: 2015-10-01

Close Date: 2016-09-01

Grant: Close

Improved outcome prediction of children with neuroblastoma using an integrated m/miRNA and DNA methylation signature.

Open Date: 2013-02-01

Close Date: 2017-06-01

Grant: Close

Epigenetic biomarkers for prognosis in children with neuroblastoma

Open Date: 2011-10-01

Close Date: 2015-10-01

Articles (10)

Extracellular RNA (cell‐free RNA; exRNA) from blood‐derived liquid biopsies is an appealing, minimally invasive source of disease biomarkers. As pre‐analytical variables strongly influence exRNA measurements, their reporting is essential for meaningful interpretation and replication of results. The aim of this review was to chart to what extent pre‐analytical variables are documented, to pinpoint shortcomings and to improve future reporting. In total, 200 blood plasma exRNA studies published in 2018 or 2023 were reviewed for annotation of 22 variables associated with blood collection, plasma preparation, and RNA purification. Our results show that pre‐analytical variables are poorly documented, with only three out of 22 variables described in over half of the publications. The percentage of variables reported ranged from 4.6% to 54.6% (mean 24.84%) in 2023 and from 4.6% to 57.1% (mean 28.60%) in 2018. Recommendations and guidelines (i.e., BRISQ, ASCO‐CAP, BloodPAC, PPMPT, and CEN standards) have currently not resulted in improved reporting. In conclusion, our results highlight the lack of reporting pre‐analytical variables in exRNA studies and advocate for a consistent use of available standards, endorsed by funders and journals.

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2024

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2023

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2022

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2022

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2022

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2022

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2021

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2021

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2020

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2020

Collaborators (7)

Cláudio Alexandre Almeida Pinheiro

Ghent University

BELGIUM
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Pekka Rappu

University lecturer

University of Turku

FINLAND
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Pieter Mestdagh

Ghent University

BELGIUM
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Johanna Bult

University Medical Center Groningen

NETHERLANDS
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Jo Vandesompele

co-founder and Chief Scientific Officer

-

BELGIUM
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David Creytens

-

BELGIUM
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Celine Everaert

Ghent University

BELGIUM
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