Chris P Ponting

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University of Edinburgh
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Recent Grants

Grant: Close

Role of Mycobacterium leprae proteins and RNAs in initiating neuropathy

Open Date: 2017-04-30

Close Date: 2021-04-29

Grant: Close

Automated phenotyping to accurately infer functional variants in clinical genetics

Open Date: 2016-05-31

Close Date: 2019-06-04

Grant: Close

Genomics & Microfluidics: taking Cell Biology into the era of Big Data

Open Date: 2016-03-01

Close Date: 2017-11-30

Grant: Close

Computational and Disease Genomics

Open Date: 2016-01-01

Close Date: 2018-03-30

Grant: Close

Delivering ELIXIR-UK

Open Date: 2016-01-01

Close Date: 2018-05-30

Articles (9)

Year:

2022

Faithful genome duplication requires appropriately controlled replication origin firing. The metazoan origin firing regulation hub Treslin/TICRR and its yeast orthologue Sld3 share the Sld3-Treslin domain and the adjacent TopBP1/Dpb11 interaction domain. We report a revised domain architecture model of Treslin/TICRR. Protein sequence analyses uncovered a conserved Ku70-homologous β-barrel fold in the Treslin/TICRR middle domain (M domain) and in Sld3. Thus, the Sld3-homologous Treslin/TICRR core comprises its three central domains, M domain, Sld3-Treslin domain, and TopBP1/Dpb11 interaction domain, flanked by non-conserved terminal domains, the CIT (conserved in Treslins) and the C terminus. The CIT includes a von Willebrand factor type A domain. Unexpectedly, MTBP, Treslin/TICRR, and Ku70/80 share the same N-terminal domain architecture, von Willebrand factor type A and Ku70-like β-barrels, suggesting a common ancestry. Binding experiments using mutants and the Sld3–Sld7 dimer structure suggest that the Treslin/Sld3 and MTBP/Sld7 β-barrels engage in homotypic interactions, reminiscent of Ku70-Ku80 dimerization. Cells expressing Treslin/TICRR domain mutants indicate that all Sld3-core domains and the non-conserved terminal domains fulfil important functions during origin firing in human cells. Thus, metazoa-specific and widely conserved molecular processes cooperate during metazoan origin firing.

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2022

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2022

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2022

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2020

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2020

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2020

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2020

Collaborators (13)

Neil Henderson

The University of Edinburgh MRC Human Genetics Unit

UNITED KINGDOM
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Matthew Bennett

University of Edinburgh

UNITED KINGDOM
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Mykhailo Y. Batiuk

EPFL (École Polytechnique Fédérale de Lausanne)

SWITZERLAND
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Fernando de la Cuesta

Universidad Autónoma de Madrid

SPAIN
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Tildon Belgard

University of Oxford

UNITED KINGDOM
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Thierry Voet

Prof. at KU Leuven

KU Leuven

BELGIUM
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Maria A. Christophorou

-

UNITED KINGDOM
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Dominik Boos

Universität Duisburg-Essen

GERMANY
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Ian McCracken

University of Oxford

UNITED KINGDOM
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Carsten Gram Hansen

University of Edinburgh

UNITED KINGDOM
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Peter Joshi

University of Edinburgh

UNITED KINGDOM
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Oriol Canela-Xandri

University of Edinburgh

UNITED KINGDOM
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Luis Sanchez Pulido

European Bioinformatics Institute

UNITED KINGDOM
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