Chun-Liang Chen

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Associate professor-Research

University of Texas Health Science Center at San Antonio
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Recent Grants

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Early Detection of Castration-Resistant Prostate Cancer by Assessing Interactions Between Circulating Tumor Cells and Accompanying Immune Cells

Open Date: 2018-06-01

Close Date: 2021-05-01

Grant: Close

Systems Analysis of Epigenomic Architecture in Cancer Progression

Open Date: 2017-05-15

Close Date: 2022-04-30

Grant: Close

Bioanalytics and Single Cell Core (BASiC)

Open Date: 2015-07-01

Close Date: 2020-06-01

Grant: Close

Epigenomics of Bisphenol A Exposure and Disease Risk

Open Date: 2009-09-01

Close Date: 2015-06-30

Grant: Close

Interrogating Epigenetic Changes in Cancer Genomes

Open Date: 2004-09-30

Close Date: 2017-02-28

Articles (10)

Year:

2023

Year:

2023

Background Bladder tumor‐infiltrating CD56 bright NK cells are more tumor cytotoxic than their CD56 dim counterparts. Identification of NK cell subsets is labor‐intensive and has limited utility in the clinical setting. Here, we sought to identify a surrogate marker of bladder CD56 bright NK cells and to test its prognostic significance. Methods CD56 bright and CD56 dim NK cells were characterized with the multiparametric flow (n = 20) and mass cytometry ( n = 21) in human bladder tumors. Transcriptome data from bladder tumors ( n = 351) profiled by The Cancer Genome Atlas (TCGA) were analyzed. The expression levels of individual markers in intratumoral CD56 bright and CD56 dim NK cells were visualized in tSNE plots. Expressions of activation markers were also compared between Killer Cell Lectin‐Like Receptor Subfamily F Member 1 (KLRF1) + and KLRF1 − NK cells. Results Intratumoral CD56 bright NK cells displayed a more activated phenotype compared to the CD56 dim subset. Multiple intratumoral cell types expressed CD56, including bladder tumor cells and nonspecific intratumoral CD56 expression was associated with worse patient survival. Thus, an alternative to CD56 as a marker of CD56 bright NK cells was sought. The activation receptor KLRF1 was significantly increased on CD56 bright but not on CD56 dim NK cells. Intratumoral KLRF1 + NK cells were more activated and expressed higher levels of activation molecules compared with KLRF1 − NK cells, analogous to the distinct effector function of NK cells across CD56 expression. High intratumoral KLRF1 was associated with improved recurrence‐free survival (hazard ratio [HR] 0.53, p = 0.01), cancer‐specific survival (HR 0.47, p = 0.02), and overall survival (HR 0.54, p = 0.02) on multivariable analyses that adjusted for clinical and pathologic variables. Conclusions KLRF1 is a promising prognostic marker in bladder cancer and may guide treatment decisions upon validation.

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2022

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2022

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2021

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2021

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2020

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2020

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2020

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2020

Collaborators (8)

Kohzoh Mitsuya

Assistant Professor

University of Texas Health Science Center at San Antonio

UNITED STATES
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Josephine Taverna

University of Texas Health Science Center at San Antonio

UNITED STATES
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Lillian Smith

Assistant Professor/Research

University of Texas Health Science Center at San Antonio

UNITED STATES
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Marieke Burleson

Associate Professor

University of the Incarnate Word

UNITED STATES
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Michael Liss

Associate Professor

University of Texas Health Science Center at San Antonio

UNITED STATES
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Robert S. Svatek

-

UNITED STATES
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Amanda Munoz

Assistant Professor of Biology

Texas A&M International University

UNITED STATES
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Masahiro Morita

Tenure-Track Assistant Professor

University of Texas Health Science Center at San Antonio

UNITED STATES
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