Debashis Sahoo
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Articles (11)
Year:
2024
Background Adenoid cystic carcinoma (ACC) is a lethal malignancy of exocrine glands, characterized by the coexistence within tumor tissues of 2 distinct populations of cancer cells, phenotypically similar to the myoepithelial and ductal lineages of normal salivary epithelia. The developmental relationship linking these 2 cell types, and their differential vulnerability to antitumor treatments, remains unknown. Methods Using single-cell RNA sequencing, we identified cell-surface markers (CD49f, KIT) that enabled the differential purification of myoepithelial-like (CD49fhigh/KITneg) and ductal-like (CD49flow/KIT+) cells from patient-derived xenografts (PDXs) of human ACCs. Using prospective xenotransplantation experiments, we compared the tumor-initiating capacity of the 2 cell types and tested whether one could differentiate into the other. Finally, we searched for signaling pathways with differential activation between the 2 cell types and tested their role as lineage-specific therapeutic targets. Results Myoepithelial-like cells displayed higher tumorigenicity than ductal-like cells and acted as their progenitors. Myoepithelial-like and ductal-like cells displayed differential expression of genes encoding for suppressors and activators of retinoic acid signaling, respectively. Agonists of retinoic acid receptor (RAR) or retinoid X receptor (RXR) signaling (all-trans retinoic acid, bexarotene) promoted myoepithelial-to-ductal differentiation, whereas suppression of RAR/RXR signaling with a dominant-negative RAR construct abrogated it. Inverse agonists of RAR/RXR signaling (BMS493, AGN193109) displayed selective toxicity against ductal-like cells and in vivo antitumor activity against PDX models of human ACC. Conclusions In human ACCs, myoepithelial-like cells act as progenitors of ductal-like cells, and myoepithelial-to-ductal differentiation is promoted by RAR/RXR signaling. Suppression of RAR/RXR signaling is lethal to ductal-like cells and represents a new therapeutic approach against human ACCs.
Year:
2023
Year:
2023
Year:
2023
Deep learning is highly pervasive in today's data-intensive era. In particular, convolutional neural networks (CNNs) are being widely adopted in a variety of fields for superior accuracy. However, computing deep CNNs on traditional CPUs and GPUs brings several performance and energy pitfalls. Several novel approaches based on ASIC, FPGA, and resistive-memory devices have been recently demonstrated with promising results. Most of them target only the inference (testing) phase of deep learning. There have been very limited attempts to design a full-fledged deep learning accelerator capable of both training and inference. It is due to the highly compute- and memory-intensive nature of the training phase. In this article, we propose LiteCON , a novel analog photonics CNN accelerator. LiteCON uses silicon microdisk-based convolution, memristor-based memory, and dense-wavelength-division-multiplexing for energy-efficient and ultrafast deep learning. We evaluate LiteCON using a commercial CAD framework (IPKISS) on deep learning benchmark models including LeNet and VGG-Net. Compared to the state of the art, LiteCON improves the CNN throughput, energy efficiency, and computational efficiency by up to 32×, 37×, and 5×, respectively, with trivial accuracy degradation.
Year:
2022
Year:
2022
Year:
2021
Year:
2021
Year:
2021
Year:
2021
Year:
2020
Collaborators (5)
Yoonsung Lee
Associate Professor
Kyungpook National University
Dennis John Kuo
Clinical Professor
University of California, San Diego
Eunjin Ryu
Assistant Professor
Seoul National University
Stephanie Grainger
Assistant Professor
Van Andel Institute
Piero Dalerba
Columbia University Irving Medical Center
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