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Eva Maria Novoa

Has grant

Group Leader

Centre for Genomic Regulation (CRG)

Spain

Research Interests

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Recent Grants

Grant: Open

Dissecting the role of sperm transcriptome dynamics in intergenerational inheritance through native RNA nanopore sequencing

Open Date: 2022-10-01

Close Date: 2027-09-01

Grant: Close

Charting the human epi-transcriptome

Open Date: 2018-01-01

Close Date: 2019-08-09

Grant: Close

Specialised ribosomes: An unexplored regulatory layer to tune the proteome

Open Date: 2017-02-10

Close Date: 2018-08-17

Grant: Close

Genome-wide characterization of human post-transcriptional RNA modifications and its roles in gene expression

Open Date: 2013-05-01

Close Date: 2016-04-30

Articles (20)

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2026

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2024

Collaborators (9)

Filip Van Nieuwerburgh

Prof. at Ghent University

Ghent University

BELGIUM

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Julia Ponomarenko

Head of Bioinformatics core

Centre for Genomic Regulation

SPAIN

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Igor Fijalkowski

Assistant Professor

Ghent University

BELGIUM

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Kim De Keersmaecker

Prof. dr.

KU Leuven

BELGIUM

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Kandarp Joshi

Computational Biologist

Brown University

UNITED STATES

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Sylvain Delaunay

Group Leader

Cancer Research UK Manchester Institute

UNITED KINGDOM

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Jean-Yves Roignant

Associate Professor

University of Lausanne

SWITZERLAND

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Eivind Valen

Professor at University of Oslo

University of Oslo

NORWAY

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Manja Marz

Full Professorship for High Throughput Sequencing Analysis

Friedrich Schiller University Jena

GERMANY

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Eva Maria Novoa

Research Interests

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Recent Grants

Articles (20)

Systematic benchmarking of dorado basecalling models for RNA modification detection with highly multiplexed nanopore sequencing

The new era of single-molecule RNA modification detection through nanopore base-calling models

HNRNPC and m6A RNA methylation control oncogenic transcription and metabolism in T-cell leukemia

Nano3P-seq: charting the coding and noncoding transcriptome at single-molecule resolution

The RMaP challenge of predicting RNA modifications by nanopore sequencing

Dynamic rRNA modifications as a source of ribosome heterogeneity

Rapid and accurate demultiplexing of direct RNA nanopore sequencing data with SeqTagger

Ribosomal protein paralogues in ribosome specialization

Toward the use of nanopore RNA sequencing technologies in the clinic: challenges and opportunities

Charting the epitranscriptomic landscape across RNA biotypes using native RNA nanopore sequencing

Context-dependent phosphorylation of CSDE1 drives interactions with ribosomes

De novo basecalling of RNA modifications at single molecule and nucleotide resolution

Disrupting tRNA modifications to target mitochondrial vulnerabilities in drug-resistant leukemia cells

Epitranscriptomic rRNA fingerprinting reveals tissue-of-origin and tumor-specific signatures

Native RNA nanopore sequencing reveals antibiotic-induced loss of rRNA modifications in the A- and P-sites (vol 15 , 10054, 2024)

Enhanced detection of RNA modifications and read mapping with high-accuracy nanopore RNA basecalling models

Comprehensive map of ribosomal 2'-O-methylation and C/D box snoRNAs in Drosophila melanogaster.

Native RNA nanopore sequencing reveals antibiotic-induced loss of rRNA modifications in the A- and P-sites

<i>N</i><SUP>6</SUP>-methyladenosine modification is not a general trait of viral RNA genomes

Elucidation of the Epitranscriptomic RNA Modification Landscape of Chikungunya Virus

Collaborators (9)

Filip Van Nieuwerburgh

Julia Ponomarenko

Igor Fijalkowski

Kim De Keersmaecker

Kandarp Joshi

Sylvain Delaunay

Jean-Yves Roignant

Eivind Valen

Manja Marz

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