Florence Abram

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Lecturer

National University of Ireland Galway

Ireland

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About

Florence Abram is a Lecturer at the National University of Ireland - Galway. Her research focuses on soil microbiomes, soil ecosystem resilience, and the implications of organic matter and metal stress on microbial dynamics. Recent publications highlight her work on various methodologies for analyzing soil health, including the evaluation of metagenomic classifiers and the impact of contaminants on microbial activity.

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Unravelling microbial community structure in anaerobic digestion systems using next-generation sequencing data

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Articles (14)

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2025

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2024

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2022

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2022

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2022

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2021

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2021

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2020

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2020

Collaborators (4)

Theo de Waal

Senior Lecturer

Dublin City University

IRELAND

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Coline Deveautour

Assistant Professor

FRANCE

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Sally Shirran

University of St. Andrews

UNITED KINGDOM

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Enda Howley

Associate Professor

Ollscoil na Gaillimhe – University of Galway

IRELAND

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Florence Abram

Research Interests

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About

Recent Grants

Articles (14)

Cattle slurry application increases soil ecosystem resistance to flooding

Consistent microbial insights across sequencing methods in soil studies: the role of reference taxonomies

An in-depth evaluation of metagenomic classifiers for soil microbiomes

Assessing the impact of interfering organic matter on soil metaproteomic workflow

Critical evaluation of the use of artificial data for machine learning based de novo peptide identification

Impacts of metal stress on extracellular microbial products, and potential for selective metal recovery

Application of a Novel Hybrid CNN-GNN for Peptide Ion Encoding

The impact of noise and missing fragmentation cleavages on de novo peptide identification algorithms

Development of an enhanced chain elongation process for caproic acid production from waste-derived lactic acid and butyric acid

Resource recovery from the anaerobic digestion of food waste is underpinned by cross-kingdom microbial activities

Survival of Escherichia coli and Listeria innocua on Lettuce after Irrigation with Contaminated Water in a Temperate Climate

Easy phylotyping of Escherichia coli via the EzClermont web app and command-line tool

Chordomics: a visualization tool for linking function to phylogeny in microbiomes

Collaborators (4)

Theo de Waal

Coline Deveautour

Sally Shirran

Enda Howley

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