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Florian Maumus

Université Paris-Saclay

France

Research Interests

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Professors in France Professors in Cell Biology Cell Biology professors in France

Articles (16)

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2026

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2026

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2026

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2025

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2025

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2025

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2023

The Caulimoviridae is a family of double-stranded DNA viruses that infect plants. The genomes of most vascular plants contain endogenous caulimovirids (ECVs), a class of repetitive DNA elements that is abundant in some plant genomes, resulting from the integration of viral DNA in the chromosomes of germline cells during episodes of infection that have sometimes occurred millions of years ago. In this review, we reflect on 25 years of research on ECVs that has shown that members of the Caulimoviridae have occupied an unprecedented range of ecological niches over time and shed light on their diversity and macroevolution. We highlight gaps in knowledge and prospects of future research fueled by increased access to plant genome sequence data and new tools for genome annotation for addressing the extent, impact, and role of ECVs on plant biology and the origin and evolutionary trajectories of the Caulimoviridae.

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2023

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2023

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2022

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2022

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2022

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2022

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2021

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2021

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2021

Collaborators (42)

Clément Gilbert

Université Paris-Saclay

FRANCE

Florian Maumus

Research Interests

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Articles (16)

Endogenous viral elements trace the ancient origins and early evolution of the Caulimoviridae

A Super‐Pangenome for Cultivated Citrus Reveals Evolutive Features During the Allopatric Phase of Their Reticulate Evolution

Evolutionary history of endogenous viral elements (EVEs) in <i>Citrus</i> species and their putative involvement in genome structure and functions

Multiple Horizontal Transfers of Immune Genes Between Distantly Related Teleost Fishes

Genome-resolved biogeography of Phaeocystales, cosmopolitan bloom-forming algae

Construction of a comprehensive library of repeated sequences for the annotation of Citrus genomes

How genomics can help biodiversity conservation

Endogenous Caulimovirids: Fossils, Zombies, and Living in Plant Genomes

Sidestepping Darwin: horizontal gene transfer from plants to insects

The era of reference genomes in conservation genomics

Recent Acquisition of Functional m6A RNA Demethylase Domain in Orchid Ty3/Gypsy Elements

Multiple Horizontal Acquisitions of Plant Genes in the Whitefly Bemisia tabaci

CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes

Gene-rich UV sex chromosomes harbor conserved regulators of sexual development

Author Correction to: Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.

Insertion of Badnaviral DNA in the Late Blight Resistance Gene (R1a) of Brinjal Eggplant (<i>Solanum melongena</i>).

Collaborators (42)

Clément Gilbert

Giulio Formenti

Vicente Pallas

Robert Waterhouse

Jan de Vries

Ian Paulsen

Lara Urban

Kara Layton

Craig Primmer

Andrea Bonisoli Alquati

Oliver Hawlitschek

Claudius F. Kratochwil

Monica V. Cunha

Isabel Rosário Amorim

Alice Dennis

Iliana Bista

Paula F Campos

Octávio Paulo

Robert Mysłajek

Liam Elbourne

Giacomo DiTullio

Sonja Vernes

Karine Labadie

Marta Pascual

Cinta Pegueroles

Manish Kumar

Shengqiang Shu

Luis Filipe Castro

José Melo‐Ferreira

Kevin R. Arrigo

Marta Novo

Agnieszka Kloch

John Lovell

Andrew Allen

Giorgio Bertorelle

Ann-Marie Waldvogel

F. Palero

Walter Salzburger

Johan Decelle

Daniele Salvi

Elena Conti

ALICE MARIA GIANI

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