Florian Maumus

Université Paris-Saclay
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Articles (12)

Endogenous Caulimovirids: Fossils, Zombies, and Living in Plant Genomes

The Caulimoviridae is a family of double-stranded DNA viruses that infect plants. The genomes of most vascular plants contain endogenous caulimovirids (ECVs), a class of repetitive DNA elements that is abundant in some plant genomes, resulting from the integration of viral DNA in the chromosomes of germline cells during episodes of infection that have sometimes occurred millions of years ago. In this review, we reflect on 25 years of research on ECVs that has shown that members of the Caulimoviridae have occupied an unprecedented range of ecological niches over time and shed light on their diversity and macroevolution. We highlight gaps in knowledge and prospects of future research fueled by increased access to plant genome sequence data and new tools for genome annotation for addressing the extent, impact, and role of ECVs on plant biology and the origin and evolutionary trajectories of the Caulimoviridae.

Year:

2023

Collaborators (35)

Clément Gilbert

Université Paris-Saclay

FRANCE

Giulio Formenti

Rockefeller University

UNITED STATES

Vicente Pallas

Research Professor

Instituto de Biología Molecular y Celular de Plantas

SPAIN

Robert Waterhouse

Professeur Boursier FNS

University of Lausanne

SWITZERLAND

Jan de Vries

Professor

University of Göttingen

GERMANY

Lara Urban

-

NEW ZEALAND

Kara Layton

University of Aberdeen

UNITED KINGDOM

Craig Primmer

Professor of Genomics; Dean of the Faculty of Biological and Environmental Sciences

University of Helsinki

FINLAND

Andrea Bonisoli Alquati

Associate Professor

California State Polytechnic University Pomona

UNITED STATES

Oliver Hawlitschek

Lecturer

University of Zurich

SWITZERLAND

Claudius F. Kratochwil

-

FINLAND

Monica V. Cunha

Associate Professor & Director of the Master Degree in Applied Microbiology

Faculdade de Ciências da Universidade de Lisboa

PORTUGAL

Isabel Rosário Amorim

University of the Azores

PORTUGAL

Alice Dennis

Professor at University of Namur

University of Namur

BELGIUM

Iliana Bista

-

GERMANY

Paula F Campos

University of Copenhagen

DENMARK

Octávio Paulo

Assistant Professor

Universidade de Aveiro

PORTUGAL

Robert Mysłajek

Associate Professor

University of Warsaw

POLAND

Sonja Vernes

University of St. Andrews

UNITED KINGDOM

Karine Labadie

Université Paris-Saclay

FRANCE

Marta Pascual

Professora catedràtica d'universitat

University of Barcelona

SPAIN

Cinta Pegueroles

University of Barcelona

SPAIN

Shengqiang Shu

DOE Joint Genome Institute

UNITED STATES

Luis Filipe Castro

Assistent Professor

Universidade do Porto Faculdade de Engenharia

PORTUGAL

José Melo‐Ferreira

-

PORTUGAL

Marta Novo

-

SPAIN

Agnieszka Kloch

associate professor

University of Warsaw

POLAND

John Lovell

HudsonAlpha Institute for Biotechnology

UNITED STATES

Giorgio Bertorelle

-

ITALY

Ann-Marie Waldvogel

assistant prof

University of Cologne

GERMANY

F. Palero

University of Valencia

SPAIN

Walter Salzburger

Full Professor

University of Basel

SWITZERLAND

Daniele Salvi

-

ITALY

Elena Conti

-

SWITZERLAND

ALICE MARIA GIANI

Weill Cornell Medical College

UNITED STATES
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