Ishi Keenum

Assistant Professor

Michigan Technological University

United States

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About

Dr. Ishi Keenum is an Assistant Professor at Michigan Technological University in the United States. His research focuses on wastewater surveillance, antibiotic resistance, and the application of metagenomics in public health. Recent publications include studies on the impact of sewer microbiomes, the standardization of microbiome data, and the ethical implications of wastewater-based testing. Dr. Keenum's work aims to enhance public health initiatives through improved understanding and monitoring of antimicrobial resistance.

Articles (18)

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2025

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DENMARK

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Valerie J. Harwood

University of South Florida

UNITED STATES

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Krista Liguori

Assistant Professor

Lehigh University

UNITED STATES

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Ishi Keenum

Research Interests

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About

Articles (18)

Communicating wastewater-based surveillance data to drive action

How does the sewer microbiome impact wastewater surveillance for antibiotic resistance?

Quantifying the impact of workshops promoting microbiome data standards and data stewardship

To what extent do water reuse treatments reduce antibiotic resistance indicators? A comparison of two full-scale systems

Optimizing Wastewater Surveillance: The Necessity of Standardized Reporting and Proficiency for Public Health

Sanitation in urban areas may limit the spread of antimicrobial resistance via flies

Unveiling the Targeted Opportunities and Universal Challenges of Wastewater-Based Surveillance for Public Health

Structured Ethical Review for Wastewater-Based Testing in Support of Public Health

Recommendations for the use of metagenomics for routine monitoring of antibiotic resistance in wastewater and impacted aquatic environments

Amplicon Sequencing Minimal Information (ASqMI): Quality and Reporting Guidelines for Actionable Calls in Biodefense Applications

Comparison of Cefotaxime-Resistant Escherichia coli and sul1 and intI1 by qPCR for Monitoring of Antibiotic Resistance of Wastewater, Surface Water, and Recycled Water

A Systematic Review of Culture-Based Methods for Monitoring Antibiotic-Resistant Acinetobacter, Aeromonas, and Pseudomonas as Environmentally Relevant Pathogens in Wastewater and Surface Water

ARGem: a new metagenomics pipeline for antibiotic resistance genes: metadata, analysis, and visualization

A framework for standardized qPCR-targets and protocols for quantifying antibiotic resistance in surface water, recycled water and wastewater

Towards the standardization of Enterococcus culture methods for waterborne antibiotic resistance monitoring: A critical review of trends across studies

mobileOG-db: a Manually Curated Database of Protein Families Mediating the Life Cycle of Bacterial Mobile Genetic Elements

Metagenomic tracking of antibiotic resistance genes through a pre‐harvest vegetable production system: an integrated lab‐, microcosm‐ and greenhouse‐scale analysis

Antimicrobial Resistance Monitoring of Water Environments: A Framework for Standardized Methods and Quality Control

Collaborators (10)

Erin Driver

Aaron Bivins

Justin Hutchison

Lydia Gushgari

Cresten Mansfeldt

Devin Bowes

Srijan Aggarwal

Connor Brown

Valerie J. Harwood

Krista Liguori

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