Jed Fuhrman

Professor

University of Southern California

United States

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About

Jed Fuhrman is a Professor at the University of Southern California, USA. His research focuses on functional biogeography of marine microbial heterotrophs, protist interactions in marine environments, and quantitative metagenomics for marine organisms. He has contributed to understanding marine microbiome structures, viral dynamics, and the effects of environmental changes on microbial communities.

Articles (15)

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2025

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2023

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2021

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2021

Collaborators (11)

Naomi Levine

University of Southern California

UNITED STATES

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Hisashi Endo

Associate Professor

Kyoto University

JAPAN

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Nathan Ahlgren

Assistant Professor

Clark University

UNITED STATES

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Catarina Magalhães

University of Porto

PORTUGAL

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Christian Lorenz Müller

Professor

Ludwig-Maximilians-Universität München

GERMANY

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J. Cesar Ignacio Espinoza

Assistant Professor

Keck Graduate Institute

UNITED STATES

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Anna Dąbrowska (Kubiszyn)

assistant professor

POLAND

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Alyson E. Santoro

UNITED STATES

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Aditya Mishra

University of Georgia

UNITED STATES

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Yuxuan Du

Assistant Professor

University of Texas at San Antonio

UNITED STATES

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Anne E Dekas

Stanford University

UNITED STATES

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Jed Fuhrman

Research Interests

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About

Articles (15)

Functional biogeography of marine microbial heterotrophs

Variational inference for microbiome survey data with application to global ocean data

With a little help from my friends: importance of protist-protist interactions in structuring marine protistan communities in the San Pedro Channel

Quantitative metagenomics for marine prokaryotes and photosynthetic eukaryotes

Inter-comparison of marine microbiome sampling protocols

Diverse Marine T4-like Cyanophage Communities Are Primarily Comprised of Low-Abundance Species Including Species with Distinct Seasonal, Persistent, Occasional, or Sporadic Dynamics

Symbiotic UCYN-A strains co-occurred with El Niño, relaxed upwelling, and varied eukaryotes over 10 years off Southern California

Constraining the composition and quantity of organic matter used by abundant marine Thaumarchaeota

ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data

Effects of phytoplankton, viral communities, and warming on free-living and particle-associated marine prokaryotic community structure

Benchmarking Community-Wide Estimates of Growth Potential from Metagenomes Using Codon Usage Statistics

Contrasting diversity patterns of prokaryotes and protists over time and depth at the San-Pedro Ocean Time series

Evaluating and Improving Small Subunit rRNA PCR Primer Coverage for Bacteria, Archaea, and Eukaryotes Using Metagenomes from Global Ocean Surveys

Metagenomics and Quantitative Stable Isotope Probing Offer Insights into Metabolism of Polycyclic Aromatic Hydrocarbon Degraders in Chronically Polluted Seawater

Benchmarking microbial growth rate predictions from metagenomes

Collaborators (11)

Naomi Levine

Hisashi Endo

Nathan Ahlgren

Catarina Magalhães

Christian Lorenz Müller

J. Cesar Ignacio Espinoza

Anna Dąbrowska (Kubiszyn)

Alyson E. Santoro

Aditya Mishra

Yuxuan Du

Anne E Dekas

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