Jianlin Cheng

Professor

University of Missouri Columbia

United States

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Articles (20)

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2024

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2023

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2023

Collaborators (2)

John Tanner

Professor of Chemistry and Biochemistry

University of Missouri Columbia

UNITED STATES

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Mu Gao

Chief Technology Officer

AgnistaBio Inc.

UNITED STATES

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Jianlin Cheng

Research Interests

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Articles (20)

Deep learning methods for protein function prediction

Geometry-complete diffusion for 3D molecule generation and optimization

De novo atomic protein structure modeling for cryoEM density maps using 3D transformer and HMM

CryoSegNet: accurate cryo-EM protein particle picking by integrating the foundational AI image segmentation model and attention-gated U-Net

HiCDiff: single-cell Hi-C data denoising with diffusion models

A Survey of Deep Learning Methods for Estimating the Accuracy of Protein Quaternary Structure Models

Cryo2StructData: A Large Labeled Cryo-EM Density Map Dataset for AI-based Modeling of Protein Structures

CryoTransformer: a transformer model for picking protein particles from cryo-EM micrographs

Protein structure accuracy estimation using geometry‐complete perceptron networks

Geometry-complete perceptron networks for 3D molecular graphs

Improving AlphaFold2-based protein tertiary structure prediction with MULTICOM in CASP15

Crystal structure of domain of unknown function 507 (DUF507) reveals a new protein fold

DIPS-Plus: The enhanced database of interacting protein structures for interface prediction

Predicted structural proteome of Sphagnum divinum and proteome-scale annotation

Single-cell Hi-C data enhancement with deep residual and generative adversarial networks

A gated graph transformer for protein complex structure quality assessment and its performance in CASP15

Combining protein sequences and structures with transformers and equivariant graph neural networks to predict protein function

Combining pairwise structural similarity and deep learning interface contact prediction to estimate protein complex model accuracy in CASP15

A large expert-curated cryo-EM image dataset for machine learning protein particle picking

Atomic protein structure refinement using all-atom graph representations and SE(3)-equivariant graph transformer

Collaborators (2)

John Tanner

Mu Gao

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