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Juan Cortés

Laboratoire d'analyse et d'architecture des systèmes
Country flagFrance

Research Interests

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Articles (19)

Year:

2026

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2026

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2025

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2025

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2025

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2025

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2024

Year:

2024

The exploration of the energy landscape of a chemical system is essential for understanding and predicting its observable properties. In most cases, this is a challenging task due to the high complexity of such landscapes, which often consist of multiple, possibly hierarchical basins that are difficult to locate and thoroughly explore. In this study, we introduce a novel method, called IGLOO (Iterative Global Exploration and Local Optimization), which aims to achieve a more efficient global exploration of the conformational space compared to existing techniques. The method utilizes a tree-based exploration inspired by the Rapidly exploring Random Tree (RRT) algorithm originating from robotics. IGLOO dynamically adjusts its exploration strategy to both homogeneously scan the landscape and focus on promising regions, avoiding redundant exploration. We evaluated IGLOO using models of two polypeptides and compared its performance to the traditional basin-hopping method and a hybrid method that also incorporates the RRT algorithm. We find that IGLOO outperforms both alternative methods in terms of efficiently and comprehensively exploring the molecular conformational space. This approach can be easily generalized to other chemical systems such as molecules on surfaces or crystalline systems.

Year:

2023

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2022

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2022

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2022

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2022

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2021

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2021

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2021

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2020

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2020

Year:

2020

Collaborators (10)

Jiri Vondrasek

group leader

Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry

CZECH REPUBLIC
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Péter Nagy

Full Professor

Semmelweis University

HUNGARY
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Magali Mathieu

Lab Head

Sanofi-Aventis Recherche et Developpement Vitry-sur-Seine Alfortville

FRANCE
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Ana M Melo

Assistant Researcher (FCT- Tenure)

University of Lisbon

PORTUGAL
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Peter Tompa

Vrije Universiteit Brussel

BELGIUM
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Benjamin Schuler

Full Professor of Molecular Biophysics

University of Zurich

SWITZERLAND
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Frans Mulder

Universitäts Professor

Johannes Kepler University Linz

AUSTRIA
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Pau Bernadó

University of Montpellier

FRANCE
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Nathalie Tarrat

-

FRANCE
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Alexander Monzon

Assistant Professor Tenure-Track (RTT researcher)

University of Padua

ITALY
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