Karthik Anantharaman

Assistant Professor

University of Wisconsin-Madison

United States

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About

Karthik Anantharaman is an Assistant Professor at the University of Wisconsin Madison, USA. His research focuses on viral ecology, microbial interactions, and metagenomic analysis, as reflected in his recent publications. His work explores the complex relationships between viruses, hosts, and their environments, addressing key questions in microbiome metabolism and virus evolution.

Articles (20)

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Collaborators (6)

Katherine D. McMahon

Professor

University of Wisconsin-Madison

UNITED STATES

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Ophelia Venturelli

Assistant Professor

University of Wisconsin-Madison

UNITED STATES

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Freeman Lan

University of Wisconsin-Madison

UNITED STATES

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Anna-Louise Reysenbach

Portland State University

UNITED STATES

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Phil Huss

University of Wisconsin-Madison

UNITED STATES

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H. Rex Gaskins

University of Illinois at Urbana-Champaign

UNITED STATES

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Karthik Anantharaman

Research Interests

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About

Articles (20)

Publisher Correction: Massively parallel single-cell sequencing of diverse microbial populations

A call for caution in the biological interpretation of viral auxiliary metabolic genes

Metagenomic analysis reveals how multiple stressors disrupt virus–host interactions in multi-trophic freshwater mesocosms

An updated view of metabolic handoffs in microbiomes

Beneath the surface: Unsolved questions in soil virus ecology

Endemism shapes viral ecology and evolution in globally distributed hydrothermal vent ecosystems

Genetic keys to microbial gut colonization

Engineering bacteriophages through deep mining of metagenomic motifs

Diversity and ecology of microbial sulfur metabolism

zol and fai: large-scale targeted detection and evolutionary investigation of gene clusters

Ecogenomics and cultivation reveal distinctive viral-bacterial communities in the surface microlayer of a Baltic Sea slick

ViWrap: A modular pipeline to identify, bin, classify, and predict viral–host relationships for viruses from metagenomes

Physiological and genomic evidence of cysteine degradation and aerobic hydrogen sulfide production in freshwater bacteria

Metagenome-based metabolic modelling predicts unique microbial interactions in deep-sea hydrothermal plume microbiomes

Diversity and distribution of sulfur metabolic genes in the human gut microbiome and their association with colorectal cancer

Diversity and distribution of sulfur metabolic genes in the human gut microbiome and their association with colorectal cancer

METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks

METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks

vRhyme enables binning of viral genomes from metagenomes

vRhyme enables binning of viral genomes from metagenomes

Collaborators (6)

Katherine D. McMahon

Ophelia Venturelli

Freeman Lan

Anna-Louise Reysenbach

Phil Huss

H. Rex Gaskins

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