Katja Baerenfaller
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Recent Grants
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Elucidating the molecular basis for the role of protein degradation in defence response
Open Date: 2016-04-01
Close Date: 2019-03-31
Grant: Close
Modelling dynamics of protein synthesis and degradation in Arabidopsis thaliana
Open Date: 2013-01-01
Close Date: 2016-12-01
Grant: Close
Protein level regulation by the ubiquitin proteasome system and in different leaf cell types
Open Date: 2011-04-01
Close Date: 2014-09-30
Articles (11)
Year:
2024
Year:
2023
Year:
2023
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2023
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2022
Year:
2022
Year:
2022
Regulatory non‐coding RNAs (ncRNAs) including small non‐coding RNAs (sRNAs), long non‐coding RNAs (lncRNAs), and circular RNAs (circRNAs) have gained considerable attention in the last few years. This is mainly due to their condition‐ and tissue‐specific expression and their various modes of action, which suggests them as promising biomarkers and therapeutic targets. One important mechanism of ncRNAs to regulate gene expression is through translation of short open reading frames (sORFs). These sORFs can be located in lncRNAs, in non‐translated regions of mRNAs where upstream ORFs (uORFs) represent the majority, or in circRNAs. Regulation of their translation can function as a quick way to adapt protein production to changing cellular or environmental cues, and can either depend solely on the initiation and elongation of translation, or on the roles of the produced functional peptides. Due to the experimental challenges to pinpoint translation events and to detect the produced peptides, translational regulation through regulatory RNAs is not well studied yet. In the case of circRNAs, they have only recently started to be recognized as regulatory molecules instead of mere artifacts of RNA biosynthesis. Of the many roles described for regulatory ncRNAs, we will focus here on their regulation during inflammation and in immunity.
Year:
2022
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2021
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2020
Year:
2020
Collaborators (22)
Milena Sokolowska
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Urszula Radzikowska
University of Zurich
Claudia Lang
University Hospital of Zurich
Yasutaka Mitamura
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Michael Villiger
Chief Innovation Officer (CINO) and Co-Owner
Fusion Automation Inc.
Walter Kistler
Head of Department
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Mübeccel Akdis
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Jochen Krauss
Researcher (Lecturer) / Prof. Dr.
University of Würzburg
DirkJan Hijnen
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Maria M Escribese
Associate Professor
Universidad CEU San Pablo
Carolyn Young
Professor & Department Head
North Carolina State University
Arturo Ottavio Rinaldi
University of Zurich
Matthias Fahrner
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Alexander Schmidt
University of Basel
Joanna Makowska
Medical University of Lodz
ALMA VILLASEÑOR
Profesor Colaborador Doctor
Universidad CEU San Pablo Facultad de Farmacia
Anja Heider
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Willem van de Veen
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Lucas Heinrich Kook
University of Zurich
Paul Lorenz Bigliardi
University of Minnesota
Ge Tan
Imperial College London
Mirjam Schenk
institute of tissue medicine and pathology university of bern bern switzerland
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