Katja Baerenfaller

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Recent Grants

Grant: Close

Elucidating the molecular basis for the role of protein degradation in defence response

Open Date: 2016-04-01

Close Date: 2019-03-31

Grant: Close

Modelling dynamics of protein synthesis and degradation in Arabidopsis thaliana

Open Date: 2013-01-01

Close Date: 2016-12-01

Grant: Close

Protein level regulation by the ubiquitin proteasome system and in different leaf cell types

Open Date: 2011-04-01

Close Date: 2014-09-30

Articles (11)

Year:

2024

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2023

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2023

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2023

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2022

Year:

2022

Year:

2022

Regulatory non‐coding RNAs (ncRNAs) including small non‐coding RNAs (sRNAs), long non‐coding RNAs (lncRNAs), and circular RNAs (circRNAs) have gained considerable attention in the last few years. This is mainly due to their condition‐ and tissue‐specific expression and their various modes of action, which suggests them as promising biomarkers and therapeutic targets. One important mechanism of ncRNAs to regulate gene expression is through translation of short open reading frames (sORFs). These sORFs can be located in lncRNAs, in non‐translated regions of mRNAs where upstream ORFs (uORFs) represent the majority, or in circRNAs. Regulation of their translation can function as a quick way to adapt protein production to changing cellular or environmental cues, and can either depend solely on the initiation and elongation of translation, or on the roles of the produced functional peptides. Due to the experimental challenges to pinpoint translation events and to detect the produced peptides, translational regulation through regulatory RNAs is not well studied yet. In the case of circRNAs, they have only recently started to be recognized as regulatory molecules instead of mere artifacts of RNA biosynthesis. Of the many roles described for regulatory ncRNAs, we will focus here on their regulation during inflammation and in immunity.

Year:

2022

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2021

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2020

Year:

2020

Collaborators (22)

Milena Sokolowska

-

SWITZERLAND
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Urszula Radzikowska

University of Zurich

SWITZERLAND
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Claudia Lang

University Hospital of Zurich

SWITZERLAND
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Yasutaka Mitamura

-

SWITZERLAND
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Michael Villiger

Chief Innovation Officer (CINO) and Co-Owner

Fusion Automation Inc.

SWITZERLAND
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Walter Kistler

Head of Department

-

SWITZERLAND
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Mübeccel Akdis

-

SWITZERLAND
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Jochen Krauss

Researcher (Lecturer) / Prof. Dr.

University of Würzburg

GERMANY
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DirkJan Hijnen

-

NETHERLANDS
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Maria M Escribese

Associate Professor

Universidad CEU San Pablo

SPAIN
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Carolyn Young

Professor & Department Head

North Carolina State University

UNITED STATES
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Arturo Ottavio Rinaldi

University of Zurich

SWITZERLAND
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Matthias Fahrner

-

GERMANY
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Alexander Schmidt

University of Basel

SWITZERLAND
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Joanna Makowska

Medical University of Lodz

POLAND
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ALMA VILLASEÑOR

Profesor Colaborador Doctor

Universidad CEU San Pablo Facultad de Farmacia

SPAIN
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Anja Heider

-

SWITZERLAND
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Willem van de Veen

-

SWITZERLAND
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Lucas Heinrich Kook

University of Zurich

SWITZERLAND
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Paul Lorenz Bigliardi

University of Minnesota

UNITED STATES
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Ge Tan

Imperial College London

UNITED KINGDOM
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Mirjam Schenk

institute of tissue medicine and pathology university of bern bern switzerland

SWITZERLAND
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