Kristine Hill
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Morphogen-like properties of small RNA gradients: A new paradigm for the role of small RNAs in developmental biology
Open Date: 2017-02-01
Close Date: 2019-02-01
Articles (15)
Year:
2024
Year:
2024
Year:
2024
Year:
2024
Somatic embryogenesis (SE) is a process by which an embryo is derived from somatic tissue. Transcription factors (TFs) have been identified that control this process. One such TF that promotes SE is AGAMOUS‐like 15 (AGL15). Prior work has shown that AGL15 can both induce and repress gene expression. One way this type of dual function TF works is via protein interactions, so a yeast 2‐hybrid (Y2H) screen was undertaken. One intriguing protein with which AGL15 interacted in Y2H was LBD40. LBD40 encodes a LATERAL ORGAN BOUNDARIES (LOB)‐domain TF that is unique to plants and is primarily expressed during seed development. Here, we confirm the AGL15‐LBD40 interaction by quantitative assays and in planta co‐immunoprecipation. We also document a role for LBD40, and the closely related protein LBD41, in supporting SE. To determine downstream genes potentially controlled by LBD40, chromatin immunoprecipitation followed by high throughput sequencing (ChIP‐seq) was used. More than 400 binding regions for LBD40 were consistently found genome‐wide. To determine genes responsive to LBD40/41 accumulation, RNA‐seq analysis of transcriptomes of wild‐type control and loss‐of‐function lbd40/lbd41 was performed. Combining these datasets provides insight into genes directly and indirectly controlled by these LOB domain TFs. The gene ontology (GO) enrichment analysis of these regulated genes showed an overrepresentation of biological processes that are associated with SE, further indicating the importance of LBD40 in SE. This work provides insight into SE, a poorly understood, but essential process to generate transgenic plants to meet agricultural demands or test gene function. This manuscript reports on experiments to understand the role that LDB40, a TF, plays in support of SE by investigating genes directly and indirectly controlled by LBD40 and examining physical and genetic interactions with other TFs active in SE. We uncover targets of LBD40 and an interacting TF of the MADS family and investigate targets involvement in SE.
Year:
2023
Year:
2023
Year:
2022
Racial uprisings often include animalized commentary and symbolic use of nonhuman animal bodies. This paper highlights some of the nonhuman animal bodies observed during the #BlackLivesMatter protests within the United States in 2020 – specifically, the use of pig, horse, and dog bodies during street protests. Displays of pigs carry with them a racially rife past in the United States. This history harmed protesters during #BlackLivesMatter protests, being described as suffering “like animals,” and the use of “pig” as an epithet for the police is explored. For the Black Cowboys who joined the protests on horseback, the physical presence of their horses amplified their message, symbolized a shift in their freedom, and positioned them eye-to-eye with the mounted police officers. The use of dog bodies within politics, how they amplified political messages as “sign-carrying vehicles,” and the dangers for them and others in protests are addressed.
Year:
2022
This paper examines the use of the term “feral” as a form of control over other animals. The concept of this “power word” is explored within the context of what it means for those who find themselves labelled as such. As a prefix, “feral” is used by various interest groups to justify the treatment of subpopulations of species, particularly with regards to wildlife conservation. The “feral” label differentiates animals that are perceived as being out of place or out of control from those who are kept as companions or commodities. “Feral” is most often used to describe an unwelcome presence or noise, and can be contrasted to alternative words, such as “wild” or “free-living” that control how these presences are perceived by humans.
Year:
2022
Year:
2022
Year:
2022
Year:
2021
Year:
2021
Year:
2020
Year:
2020
Collaborators (21)
Nancy Gee
Professor & Director, Center for Human-Animal Interaction
Virginia Commonwealth University
Matthew Ruby
Lecturer
La Trobe University
Ranjan Swarup
University of Nottingham
Janette Young
University of South Australia
chiara mariti
associate professor
Università degli Studi di Pisa Dipartimento di Economia e Management
Michelle Szydlowski
Visiting Assistant Professor
University of Miami
Debbie Busby
-
Tiamat Warda
University of Lapland
Leanne Nieforth
Assistant Professor
Purdue University
Sun-A Kim
Chungbuk National University
Beth Lanning
Professor, Associate Chair, MPH-Community Health Science Director
Baylor University
Sharyn E. Perry
-
Dac Loc Mai
Associate Lecturer - Early Career Development Fellow
La Trobe University - Bendigo Campus
Brian Danley
Assistant Professor
Uppsala University
Emma Power
Associate Professor
University of Western Sydney
Helen Lewis
Swansea University
Marie-Jose Enders-Slegers
Prof.dr.
-
Rie Wolfe
Assistant Professor
Ritsumeikan University
Jade Hooper
University of Lancaster
Manohar Chakrabarti
Assistant Professor
The University of Texas Rio Grande Valley
Wendy Stone
Professor of Housing and Social Policy
Swinburne University of Technology
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