Kristine Hill

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Morphogen-like properties of small RNA gradients: A new paradigm for the role of small RNAs in developmental biology

Open Date: 2017-02-01

Close Date: 2019-02-01

Articles (15)

Year:

2024

Year:

2024

Year:

2024

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2024

Somatic embryogenesis (SE) is a process by which an embryo is derived from somatic tissue. Transcription factors (TFs) have been identified that control this process. One such TF that promotes SE is AGAMOUS‐like 15 (AGL15). Prior work has shown that AGL15 can both induce and repress gene expression. One way this type of dual function TF works is via protein interactions, so a yeast 2‐hybrid (Y2H) screen was undertaken. One intriguing protein with which AGL15 interacted in Y2H was LBD40. LBD40 encodes a LATERAL ORGAN BOUNDARIES (LOB)‐domain TF that is unique to plants and is primarily expressed during seed development. Here, we confirm the AGL15‐LBD40 interaction by quantitative assays and in planta co‐immunoprecipation. We also document a role for LBD40, and the closely related protein LBD41, in supporting SE. To determine downstream genes potentially controlled by LBD40, chromatin immunoprecipitation followed by high throughput sequencing (ChIP‐seq) was used. More than 400 binding regions for LBD40 were consistently found genome‐wide. To determine genes responsive to LBD40/41 accumulation, RNA‐seq analysis of transcriptomes of wild‐type control and loss‐of‐function lbd40/lbd41 was performed. Combining these datasets provides insight into genes directly and indirectly controlled by these LOB domain TFs. The gene ontology (GO) enrichment analysis of these regulated genes showed an overrepresentation of biological processes that are associated with SE, further indicating the importance of LBD40 in SE. This work provides insight into SE, a poorly understood, but essential process to generate transgenic plants to meet agricultural demands or test gene function. This manuscript reports on experiments to understand the role that LDB40, a TF, plays in support of SE by investigating genes directly and indirectly controlled by LBD40 and examining physical and genetic interactions with other TFs active in SE. We uncover targets of LBD40 and an interacting TF of the MADS family and investigate targets involvement in SE.

Year:

2023

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2023

Year:

2022

Racial uprisings often include animalized commentary and symbolic use of nonhuman animal bodies. This paper highlights some of the nonhuman animal bodies observed during the #BlackLivesMatter protests within the United States in 2020 – specifically, the use of pig, horse, and dog bodies during street protests. Displays of pigs carry with them a racially rife past in the United States. This history harmed protesters during #BlackLivesMatter protests, being described as suffering “like animals,” and the use of “pig” as an epithet for the police is explored. For the Black Cowboys who joined the protests on horseback, the physical presence of their horses amplified their message, symbolized a shift in their freedom, and positioned them eye-to-eye with the mounted police officers. The use of dog bodies within politics, how they amplified political messages as “sign-carrying vehicles,” and the dangers for them and others in protests are addressed.

Year:

2022

This paper examines the use of the term “feral” as a form of control over other animals. The concept of this “power word” is explored within the context of what it means for those who find themselves labelled as such. As a prefix, “feral” is used by various interest groups to justify the treatment of subpopulations of species, particularly with regards to wildlife conservation. The “feral” label differentiates animals that are perceived as being out of place or out of control from those who are kept as companions or commodities. “Feral” is most often used to describe an unwelcome presence or noise, and can be contrasted to alternative words, such as “wild” or “free-living” that control how these presences are perceived by humans.

Year:

2022

Year:

2022

Year:

2022

Year:

2021

Year:

2021

Year:

2020

Year:

2020

Collaborators (21)

Nancy Gee

Professor & Director, Center for Human-Animal Interaction

Virginia Commonwealth University

UNITED STATES
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Matthew Ruby

Lecturer

La Trobe University

AUSTRALIA
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Ranjan Swarup

University of Nottingham

UNITED KINGDOM
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Janette Young

University of South Australia

AUSTRALIA
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chiara mariti

associate professor

Università degli Studi di Pisa Dipartimento di Economia e Management

ITALY
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Michelle Szydlowski

Visiting Assistant Professor

University of Miami

UNITED STATES
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Debbie Busby

-

UNITED KINGDOM
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Tiamat Warda

University of Lapland

FINLAND
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Leanne Nieforth

Assistant Professor

Purdue University

UNITED STATES
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Sun-A Kim

Chungbuk National University

SOUTH KOREA
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Beth Lanning

Professor, Associate Chair, MPH-Community Health Science Director

Baylor University

UNITED STATES
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Sharyn E. Perry

-

UNITED STATES
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Dac Loc Mai

Associate Lecturer - Early Career Development Fellow

La Trobe University - Bendigo Campus

AUSTRALIA
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Brian Danley

Assistant Professor

Uppsala University

SWEDEN
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Emma Power

Associate Professor

University of Western Sydney

AUSTRALIA
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Helen Lewis

Swansea University

UNITED KINGDOM
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Marie-Jose Enders-Slegers

Prof.dr.

-

NETHERLANDS
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Rie Wolfe

Assistant Professor

Ritsumeikan University

JAPAN
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Jade Hooper

University of Lancaster

UNITED KINGDOM
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Manohar Chakrabarti

Assistant Professor

The University of Texas Rio Grande Valley

UNITED STATES
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Wendy Stone

Professor of Housing and Social Policy

Swinburne University of Technology

AUSTRALIA
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