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Milot Mirdita

Assistant Professor

Sungkyunkwan University

South Korea

Research Interests

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Professors in South Korea Professors in Biochemistry Biochemistry professors in South Korea

Articles (20)

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2026

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2025

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2024

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2023

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2023

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2023

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2023

Collaborators (7)

Martin Frith

University of Tokyo

JAPAN

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Martin Steinegger

Assistant Professor

Seoul National University

SOUTH KOREA

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Cameron Gilchrist

Seoul National University

SOUTH KOREA

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Bertil Schmidt

Johannes Gutenberg Universität Mainz

GERMANY

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Christian Dallago

Scientific Researcher

Duke University

UNITED STATES

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Sergey Ovchinnikov

Assistant Professor

Massachusetts Institute of Technology

UNITED STATES

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Pedro Beltrao

Associate Professor

ETH Zürich

SWITZERLAND

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Milot Mirdita

Research Interests

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Articles (20)

Expanding the scope of protein language modeling to protein-protein interactions with MSA Pairformer

Structural motif search across the protein universe with Folddisco

Simple and Thorough Detection of Related Sequences with Position-Varying Probabilities of Substitutions, Insertions, and Deletions

Multiple Protein Structure Alignment at Scale with FoldMason

GPU-accelerated homology search with MMseqs2

Rapid and sensitive protein complex alignment with Foldseek-Multimer

BFVD—a large repository of predicted viral protein structures

Easy and interactive taxonomic profiling with Metabuli App

Easy and accurate protein structure prediction using ColabFold

Petabase-Scale Homology Search for Structure Prediction

Fast and accurate protein structure search with Foldseek

DescribePROT in 2023: more, higher-quality and experimental annotations and improved data download options

TransAnnot—a fast transcriptome annotation pipeline

AlphaFold Protein Structure Database in 2024: providing structure coverage for over 214 million protein sequences.

Bilingual Language Model for Protein Sequence and Structure

Cross-phyla protein annotation by structural prediction and alignment (vol 24, 113, 2023)

Clustering-predicted structures at the scale of the known protein universe

Foldcomp: a library and format for compressing and indexing large protein structure sets

Cross-phyla protein annotation by structural prediction and alignment.

LambdaPP: Fast and accessible protein-specific phenotype predictions.

Collaborators (7)

Martin Frith

Martin Steinegger

Cameron Gilchrist

Bertil Schmidt

Christian Dallago

Sergey Ovchinnikov

Pedro Beltrao

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