Narutoshi Kamiya

Specially Appointed Professor

University of Hyogo

Japan

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About

Narutoshi Kamiya is a Specially Appointed Professor at the University of Hyogo, Japan. His research primarily focuses on structural dynamics, molecular dynamics simulations, and computational drug design, as demonstrated by his recent publications. Notable areas of study include the binding mechanisms in molecular interactions and advancements in simulation techniques to improve understanding of biomolecular processes.

Articles (17)

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2024

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2023

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2022

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2022

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2021

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2021

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2021

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2021

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2021

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2021

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2021

Collaborators (7)

Koichiro Kato

Kyushu University

JAPAN

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Gert-Jan Bekker

Specially Appointed Lecturer

Osaka University

JAPAN

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Shigeyuki Matsumoto

Kyoto University

JAPAN

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Haruki Nakamura

ProfessorEmeritus

Osaka University

JAPAN

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Masayuki Oda

Kyoto University

JAPAN

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Kei Moritsugu

Professor

Osaka University

JAPAN

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Nobutaka Numoto

Special-Appointment Associate Professor

Okayama University

JAPAN

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Narutoshi Kamiya

Research Interests

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About

Articles (17)

Binding Mechanism between Platelet Glycoprotein and Cyclic Peptide Elucidated by McMD-Based Dynamic Docking

Binding Mechanism of Riboswitch to Natural Ligand Elucidated by McMD-Based Dynamic Docking Simulations

Enhanced Coarse-Grained Molecular Dynamics Simulation with a Smoothed Hybrid Potential Using a Neural Network Model

Structural dynamics of the Ca2+-regulated cutinase towards structure-based improvement of PET degradation activity

Molecular Dynamics Unveils Multiple-Site Binding of Inhibitors with Reduced Activity on the Surface of Dihydrofolate Reductase

Elucidation of binding mechanism, affinity and complex structure between mWT1 tumor‐associated antigen peptide and HLA‐A*24:02

Mutual induced-fit mechanism drives binding between intrinsically disordered Bim and cryptic binding site of Bcl-xL

Binding free-energy landscapes of small molecule binder and non-binder to FMN riboswitch: All-atom molecular dynamics

Advancing the field of computational drug design using multicanonical molecular dynamics-based dynamic docking

Fly casting with ligand sliding and orientational selection supporting complex formation of a GPCR and a middle sized flexible molecule

N-Terminal-Driven Binding Mechanism of an Antigen Peptide to Human Leukocyte Antigen-A*2402 Elucidated by Multicanonical Molecular Dynamic-Based Dynamic Docking and Path Sampling Simulations

Accurate Binding Configuration Prediction of a G-Protein-Coupled Receptor to Its Antagonist Using Multicanonical Molecular Dynamics-Based Dynamic Docking

Exploring ligand binding pathways on proteins using hypersound-accelerated molecular dynamics

Structural basis of mutants of <scp>PET</scp>‐degrading enzyme from <i>Saccharomonospora viridis</i><scp>AHK190</scp> with high activity and thermal stability

Flexibility and Cell Permeability of Cyclic Ras-Inhibitor Peptides Revealed by the Coupled Nosé–Hoover Equation

Difference of binding modes among three ligands to a receptor mSin3B corresponding to their inhibitory activities.

Cryptic-site binding mechanism of medium-sized Bcl-xL inhibiting compounds elucidated by McMD-based dynamic docking simulations.

Collaborators (7)

Koichiro Kato

Gert-Jan Bekker

Shigeyuki Matsumoto

Haruki Nakamura

Masayuki Oda

Kei Moritsugu

Nobutaka Numoto

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