Nicolas Parisot

Assistant Professor in Bioinformatics

Institut National des Sciences Appliquées de Lyon

France

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Dr. Nicolas Parisot is an Assistant Professor in Bioinformatics at the Institut National des Sciences Appliquées de Lyon, France. His research focuses on the interactions between host organisms and their symbiotic partners, with recent work highlighting gene expression in endosymbionts and metabolic networks in arthropods. He has contributed to multiple studies on pest resistance and genome annotation, advancing the understanding of microbial interactions and host defense mechanisms.

Nicolas Parisot

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Articles (21)

High‐Throughput Tn‐Seq Screens Identify Both Known and Novel Pseudomonas putida KT2440 Genes Involved in Metal Tolerance

ArtSymbioCyc, a metabolic network database collection dedicated to arthropod symbioses: a case study, the tripartite cooperation in Sipha maydis

Annotation of transcription factors, chromatin-associated factors, and basal transcription machinery in the pea aphid, Acyrthosiphon pisum, and development of the ATFdb database, a resource for studies of transcriptional regulation

Phytophthora alni Infection Reinforces the Defense Reactions in Alnus glutinosa - Frankia Roots to the Detriment of Nodules

PacBio Hi-Fi genome assembly of Sipha maydis, a model for the study of multipartite mutualism in insects

Cereal weevils' antimicrobial peptides: at the crosstalk between development, endosymbiosis and immune response

MicroAnnot: A Dedicated Workflow for Accurate Microsporidian Genome Annotation

Endosymbiont-containing germarium transcriptional survey in a cereal weevil depicts downregulation of immune effectors at the onset of sexual maturity.

GReNaDIne: A Data-Driven Python Library to Infer Gene Regulatory Networks from Gene Expression Data

Coordination of host and endosymbiont gene expression governs endosymbiont growth and elimination in the cereal weevil Sitophilus spp.

Differential responses of Ceratitis capitata to infection by the entomopathogenic fungus Purpureocillium lilacinum

Efficient compartmentalization in insect bacteriomes protects symbiotic bacteria from host immune system.

Aphid BCR4 Structure and Activity Uncover a New Defensin Peptide Superfamily

The Di-Symbiotic Systems in the Aphids Sipha maydis and Periphyllus lyropictus Provide a Contrasting Picture of Recent Co-Obligate Nutritional Endosymbiosis in Aphids

Evolutionary diversification of insulin-related peptides (IRPs) in aphids and spatiotemporal distribution in Acyrthosiphon pisum

The transposable element-rich genome of the cereal pest Sitophilus oryzae.

Spatial and morphological reorganization of endosymbiosis during metamorphosis accommodates adult metabolic requirements in a weevil.

Erratum: The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest (BMC Biology (2020) 18 (90) DOI: 10.1186/s12915-020-00820-5)

Evolutionary novelty in the apoptotic pathway of aphids

Drosophila-associated bacteria differentially shape the nutritional requirements of their host during juvenile growth

Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera

Collaborators (28)

Abdelaziz Heddi

Thierry Hance

Rita Rebollo

Erwan GUEGUEN

Cristina Vieira

Jose Francisco Sanchez-Herrero

Nikoletta Galambos

Olivier Catrice

Anja Buttstedt

Paul Nabity

Jean-Luc Gala

Hubert CHARLES

Valérie Polonais

Cornelis Johannes Pieter Grimmelikhuijzen

Astrid Forneck

Agnès Rodrigue

Agnès Vallier

Emmanuelle Jousselin

Stefano Colella

Anna Zaidman-Rémy

François Leulier

Hasna BOUBAKRI

Emmanuelle Jacquin-Joly

Federica Calevro

Joshua Gibson

Sergio Peignier

Florent Masson

Aurélien Vigneron

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