Ola Söderberg
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About
Ola Söderberg is a Professor at Uppsala University in Sweden. His research areas include the interplay between vitamin D and growth factors, oligonucleotide design, and the visualization of DNA damage. He has contributed to significant advancements in understanding cellular signaling and the molecular interactions of proteins. His recent articles reflect a strong focus on biochemistry and molecular biology methodologies.
Positions (1)
Uppsala University
Uppsala University
7 months ago
Uppsala University is offering a PhD position in Pharmaceutical Sciences, focusing on drug development and experimental as well as translational research. The doctoral project is based in the Department of Pharmaceutical Biosciences, an interdisciplinary environment at the heart of Uppsala's Biomedicine Centre, and is affiliated with the Cell Biology and Biotechnology research group. The research centers on a novel method for detecting single-strand breaks (SSB) in DNA, enabling new studies of SSB during cellular processes and in response to damage such as radiation. The project aims to determine the necessity of SSB formation upstream of transcription start sites for efficient transcription, identify the enzymes responsible, and investigate drug candidates that inhibit SSB formation to downregulate gene expression. Applicants must hold a master's degree in pharmaceutical, medical, or natural sciences, or have equivalent qualifications (at least 240 ECTS credits, with 60 at advanced level and an independent project). Proficiency in English is required. Experience with molecular biology techniques (CRISPR/Cas9, DNA sequencing, cloning) is advantageous, as is knowledge of cell biology and DNA repair. Selection is based on academic qualifications, relevant coursework, research experience, and personal suitability, including analytical skills, accuracy, flexibility, and teamwork. The position is full-time and fixed-term, with a monthly salary according to Uppsala University's guidelines. The doctoral program typically lasts four years (up to five with departmental duties). The application deadline is March 5, 2026. Applications should be submitted via the university's recruitment system and must include a cover letter, CV, degree certificates, transcripts, thesis, and references. For more information, contact Docent Johan Heldin or Professor Ola Söderberg. This is an excellent opportunity to join one of Europe's leading research environments in pharmaceutical sciences, with access to state-of-the-art laboratories and a vibrant academic community. The university is recognized for its high-quality research and supportive work environment, as evidenced by its "HR Excellence in Research" award from the EU Commission.
7 months ago
Articles (12)
In the comet assay, tails are formed after single-cell gel electrophoresis if the cells have been exposed to genotoxic agents. These tails include a mixture of both DNA single-strand breaks (SSBs) and double-strand breaks (DSBs). However, these two types of strand breaks cannot be distinguished using comet assay protocols with conventional DNA stains. Since DSBs are more problematic for the cells, it would be useful if the SSBs and DSBs could be differentially identified in the same comet. In order to be able to distinguish between SSBs and DSBs, we designed a protocol for polymerase-assisted DNA damage analysis (PADDA) to be used in combination with the Flash comet protocol, or on fixed cells. By using DNA polymerase I to label SSBs and terminal deoxynucleotidyl transferase to label DSBs with fluorophore-labelled nucleotides. Herein, TK6-cells or HaCat cells were exposed to either hydrogen peroxide (H2O2), ionising radiation (X-rays) or DNA cutting enzymes, and then subjected to a comet protocol followed by PADDA. PADDA offers a wider detection range, unveiling previously undetected DNA strand breaks.
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2024
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2024
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2024
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2023
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2023
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2023
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2022
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2022
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2022
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2021
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2020
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2020
Collaborators (5)
K. Eszter Borbas
Uppsala University
Laura Francés-Soriano
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Sara Ricardo
Associate Professor
Instituto Universitário de Ciências da Saúde
Maria Norlin
Associate Professor/Researcher
Uppsala Universitet Farmaceutiska fakulteten
Johan Heldin
Uppsala University
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