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Rosa Fernandez

Chair

Institute of Evolutionary Biology

Spain

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Articles (15)

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2026

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2026

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2026

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2026

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2023

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2023

Collaborators (10)

Rebekah A. Oomen

NORWAY

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Ann Mc Cartney

University of California, Santa Cruz

UNITED STATES

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Marta Turon

Museo Nacional de Ciencias Naturales

SPAIN

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Tyler Alioto

Genome Assembly and Annotation Team Leader

Centro Nacional de Análisis Genómico (CNAG)

SPAIN

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Marc Ventura

Researcher

Consejo Superior de Investigaciones Cientificas

SPAIN

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Thanos Dailianis

Senior Researcher

Hellenic Centre for Marine Research

GREECE

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Sergi Valverde

CSIC Tenured Scientist

Institute of Evolutionary Biology

SPAIN

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Astrid Böhne

Section head

University of Basel

SWITZERLAND

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Marta Novo

SPAIN

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Torsten Struck

Professor of Evolutionary Genomics

University of Oslo

NORWAY

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Rosa Fernandez

Research Interests

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Articles (15)

Rethinking molecular evolution through protein language model embeddings

ERGA-BGE genome of Valencia hispanica (Valenciennes, 1826): a critically endangered Iberian toothcarp

ERGA-BGE reference genome of Holothuria (Platyperona) sanctori: a sea cucumber from the Mediterranean Sea

FANTASIA suite: a reproducible and configurable framework for embedding-based functional annotation of proteins

ERGA-BGE reference genome of Leviellus thorelli, a common orb-weaving spider representing the Zygiellidae family

Parallel Genomic Remodelling Associated With Independent Terrestrialization Events in Arthropods

No Mate, No Problem: Molecular Mechanisms Involved in Parthenogenesis in the Cosmopolitan Earthworm Aporrectodea trapezoides (Annelida, Clitellata)

ERGA-BGE reference genome of the lineid heteronemertean Lineus lacteus (Pilidiophora, Nemertea)

Breaking bad: when clitellate genomes go rogue

FANTASIA leverages language models to decode the functional dark proteome across the animal tree of life

Contextualising samples: supporting reference genomes of European biodiversity through sample and associated metadata collection

MATEdb2, a Collection of High-Quality Metazoan Proteomes across the Animal Tree of Life to Speed Up Phylogenomic Studies

The genome sequence of the Montseny horsehair worm, Gordionus montsenyensis sp. nov., a key resource to investigate Ecdysozoa evolution

Parallel and convergent genomic changes underlie independent subterranean colonization across beetles

Parallel duplication and loss of aquaporin‐coding genes during the “out of the sea” transition as potential key drivers of animal terrestrialization

Collaborators (10)

Rebekah A. Oomen

Ann Mc Cartney

Marta Turon

Tyler Alioto

Marc Ventura

Thanos Dailianis

Sergi Valverde

Astrid Böhne

Marta Novo

Torsten Struck

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