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Runyang Lou

Assistant Project Scientist

University of California, Berkeley
Country flagUnited States

Research Interests

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Articles (7)

Year:

2026

Year:

2024

Year:

2024

Year:

2024

Year:

2024

Genomic methods are becoming increasingly valuable and established in ecological research, particularly in nonmodel species. Supporting their progress and adoption requires investment in resources that promote (i) reproducibility of genomic analyses, (ii) accessibility of learning tools and (iii) keeping pace with rapidly developing methods and principles. We introduce marineomics.io, an open‐source, living document to disseminate tutorials, reproducibility tools and best principles for ecological genomic research in marine and nonmodel systems. The website's existing content spans population and functional genomics, including current recommendations for whole‐genome sequencing, RAD‐seq, Pool‐seq and RNA‐seq. With the goal to facilitate the development of new, similar resources, we describe our process for aggregating and synthesizing methodological principles from the ecological genomics community to inform website content. We also detail steps for authorship and submission of new website content, as well as protocols for providing feedback and topic requests from the community. These web resources were constructed with guidance for doing rigorous, reproducible science. Collaboration and contributions to the website are encouraged from scientists of all skill sets and levels of expertise.

Year:

2023

Year:

2022

Collaborators (11)

Jakob Hemmer-Hansen

Senior researcher

Technical University of Denmark

DENMARK
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Nina O Therkildsen

Cornell University

UNITED STATES
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Andrea Guarracino

Assistant Professor

Translational Genomics Research Institute

UNITED STATES
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Pierre De Wit

Senior Lecturer

University of Gothenburg

SWEDEN
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Steven B. Roberts

University of Washington

UNITED STATES
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Peter Sudmant

Associate Professor

University of California, Berkeley

UNITED STATES
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Katherine Silliman

Assistant Research Professor

Mississippi State University

UNITED STATES
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Joana L. Rocha

Assistant Professor of Biology and Genomics

NYU School of Medicine

UNITED STATES
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Dorte Bekkevold

Technical University of Denmark

DENMARK
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Yingguang Frank Chan

Associate Professor

University of Groningen

NETHERLANDS
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Camille Saurel

Technical University of Denmark

DENMARK
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