Shujun Ou

Assistant Professor

Ohio State University

United States

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Dr. Shujun Ou is an Assistant Professor at The Ohio State University in the United States. His research focuses on genomics, specifically in the areas of transposable elements, genome assembly, and chromatin structure in plants. Recent publications include works on whole-genome annotation in maize, gapless assembly using nanopore sequencing, and the genomic dynamics of cotton and apple species.

Articles (14)

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2024

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2024

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2024

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2024

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2024

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2023

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2023

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2023

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2022

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2022

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2022

Collaborators (7)

Yinjie Qiu

University of Minnesota

UNITED STATES

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Michael Schatz

Bloomberg Distinguished Professor

Johns Hopkins University

UNITED STATES

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liao herui

Massachusetts Institute of Technology

UNITED STATES

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Andrea Guarracino

Assistant Professor

University of Tennessee Health Science Center

UNITED STATES

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Christopher Gottschalk

UNITED STATES

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Candice N Hirsch

University of Minnesota

UNITED STATES

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Sarah Anderson

Assistant Professor

Iowa State University

UNITED STATES

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Shujun Ou

Research Interests

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About

Articles (14)

Four Strategies for Whole-Genome Annotation of Transposable Elements and Repeats in Maize

Navigating the Maze of Maize Genomics: the Impact of Transposable Elements and Tandem Repeats

Evolutionary Dynamics of Chromatin Structure and Duplicate Gene Expression in Diploid and Allopolyploid Cotton

Response to Commentary: Accounting for diverse transposable element landscapes is key to developing and evaluating accurate de novo annotation strategies

Differences in activity and stability drive transposable element variation in tropical and temperate maize

Accelerating de novo SINE annotation in plant and animal genomes

Gapless assembly of complete human and plant chromosomes using only nanopore sequencing

Approaching complete genomes, transcriptomes and epi-omes with accurate long-read sequencing

A haplotype resolved chromosome‐scale assembly of North American wild apple Malus fusca and comparative genomics of the fire blight Mfu10 locus

A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.)

A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.)

Antagonistic control of seed dormancy in rice by two bHLH transcription factors

Author Correction: Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline (Genome Biology, (2021), 22, 1, (332), 10.1186/s13059-021-02529-2)

Author Correction: Genomic basis of geographical adaptation to soil nitrogen in rice (Nature, (2021), 590, 7847, (600-605), 10.1038/s41586-020-03091-w)

Collaborators (7)

Yinjie Qiu

Michael Schatz

liao herui

Andrea Guarracino

Christopher Gottschalk

Candice N Hirsch

Sarah Anderson

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