Shun Hirota

Professor

Nara Institute of Science and Technology（NAIST）

Japan

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Shun Hirota is a Professor at the Nara Institute of Science and Technology (NAIST), Japan. His research focuses on structural biology, with recent articles exploring themes such as cytochrome c, antibody structure, and heme interactions. His work employs both experimental and computational methods to investigate molecular mechanisms in protein dynamics and domain swapping.

Articles (18)

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2025

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2021

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2021

Collaborators (8)

Yoshiki Higuchi

Professor

University of Hyogo

JAPAN

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Kowit Hengphasatporn

Assistant Professor

University of Tsukuba

JAPAN

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Lian Duan

University of Tsukuba

JAPAN

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Vincent Fourmond

Aix-Marseille University

FRANCE

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Christophe Léger

FRANCE

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Hideaki Ogata

Professor

University of Hyogo

JAPAN

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Tsuyoshi Mashima

Nara Institute of Science and Technology

JAPAN

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Norio Yoshida

Professor

Nagoya University

JAPAN

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Shun Hirota

Research Interests

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About

Articles (18)

Apoprotein Intermolecular Interactions and Heme Insertion for 3D Domain Swapping in Myoglobin

Construction of a Cyclic Regular‐Triangle Trimer of Cytochrome c555 with a Central Hole Using Sortase A

Structural and biochemical differences between non-catalytic and catalytic antibodies

Why is Dimeric 3D Domain Swapping in Antibody Light Chains Missing from the Solution? Atomistic Insights Mechanisms

Construction of ligand-binding controlled hemoprotein assemblies utilizing 3D domain swapping

Anion effects on the structure and stability of 3D domain–swapped cytochrome c dimer

Experimental and Computational Studies on Domain-Swapped Structure Stabilization of an Antibody Light Chain by Disulfide Bond Introduction

Resonance Raman Studies on Heme Ligand Stretching Modes in Methionine80-Depleted Cytochrome c: Fe–His, Fe–O2, and O–O Stretching Modes

Structural and thermodynamic insights into antibody light chain tetramer formation through 3D domain swapping

Structural region essential for amyloid fibril formation in cytochrome c elucidated by optical trapping

Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase

Structural and spectroscopic characterization of CO inhibition of [NiFe]-hydrogenase from Citrobacter sp. S-77

Construction of ferritin hydrogels utilizing subunit–subunit interactions

Use of 3D domain swapping in constructing supramolecular metalloproteins

Rational design of metal-binding sites in domain-swapped myoglobin dimers

New Aspects of Cytochromec: 3D Domain Swapping, Membrane Interaction, Peroxidase Activity, and Met80 Sulfoxide Modification

Proton Transfer Mechanisms in Bimetallic Hydrogenases

Experimental and theoretical study on converting myoglobin into a stable domain-swapped dimer by utilizing a tight hydrogen bond network at the hinge region

Collaborators (8)

Yoshiki Higuchi

Kowit Hengphasatporn

Lian Duan

Vincent Fourmond

Christophe Léger

Hideaki Ogata

Tsuyoshi Mashima

Norio Yoshida

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