Susana Ladra

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Associate Professor

Universidade da Coruña
Country flagSpain

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Bioinformatics and Information Retrieval Data Structures Analysis and Design

Open Date: 2016-01-01

Close Date: 2019-12-31

Articles (16)

Year:

2024

Year:

2024

Year:

2023

Year:

2023

Year:

2023

Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM‐BC package, adjusting the P ‐values by the Holm‐Bonferroni method, revealed that Parvimonas was significantly over‐represented in feces from CRC patients ( P ‐value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non‐neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non‐invasive samples such as feces.

Year:

2023

Year:

2023

Year:

2023

Year:

2023

Year:

2022

Year:

2022

Year:

2022

Year:

2022

Year:

2022

Year:

2022

Year:

2021

Collaborators (12)

José R. Paramá

Associtated Prof.

Universidade da Coruña

SPAIN
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Germán Bou

-

SPAIN
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Fernando Silva-Coira

Universidade da Coruña

SPAIN
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Miguel R. Luaces

Universidade da Coruña

SPAIN
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Leena Salmela

University of Helsinki

FINLAND
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Diego Seco

Profesor Titular de Universidad

Universidade da Coruña

SPAIN
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Travis Gagie

Associate Professor

Dalhousie University

CANADA
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Margarita Poza

-

SPAIN
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Ricardo Cao

Full Professor (Catedrático de Universidad)

Universidade da Coruña Facultade de Informática

SPAIN
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Miguel Rodríguez Penabad

Associate Professor (Titular de Universidad)

Universidade da Coruña

SPAIN
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Javier Tarrío-Saavedra

Universidade da Coruña

SPAIN
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Ángeles Cid

Professor

Universidade da Coruña

SPAIN
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