Susana Ladra
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Associate Professor
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Grant: Close
Bioinformatics and Information Retrieval Data Structures Analysis and Design
Open Date: 2016-01-01
Close Date: 2019-12-31
Articles (16)
Year:
2024
Year:
2024
Year:
2023
Year:
2023
Year:
2023
Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM‐BC package, adjusting the P ‐values by the Holm‐Bonferroni method, revealed that Parvimonas was significantly over‐represented in feces from CRC patients ( P ‐value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non‐neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non‐invasive samples such as feces.
Year:
2023
Year:
2023
Year:
2023
Year:
2023
Year:
2022
Year:
2022
Year:
2022
Year:
2022
Year:
2022
Year:
2022
Year:
2021
Collaborators (12)
José R. Paramá
Associtated Prof.
Universidade da Coruña
Germán Bou
-
Fernando Silva-Coira
Universidade da Coruña
Miguel R. Luaces
Universidade da Coruña
Leena Salmela
University of Helsinki
Diego Seco
Profesor Titular de Universidad
Universidade da Coruña
Travis Gagie
Associate Professor
Dalhousie University
Margarita Poza
-
Ricardo Cao
Full Professor (Catedrático de Universidad)
Universidade da Coruña Facultade de Informática
Miguel Rodríguez Penabad
Associate Professor (Titular de Universidad)
Universidade da Coruña
Javier Tarrío-Saavedra
Universidade da Coruña
Ángeles Cid
Professor
Universidade da Coruña
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