Takumi Yamaguchi

特任准教授（研究連携コーディネータ）/Project Associate Professor

自然科学研究機構　生命創成探究センター/Exploratory Research Center on Life and Living Systems

Japan

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About

Takumi Yamaguchi is a Project Associate Professor at the Exploratory Research Center on Life and Living Systems in Japan. His research primarily focuses on glycoprotein dynamics, glycan conformational ensembles, and the development of computational models for biomolecular interactions. Notable recent publications include advancements in the Drude Polarizable Force Field and studies utilizing both experimental and computational approaches to explore the dynamics of biomolecules.

Articles (13)

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2025

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2025

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2025

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2025

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2024

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2023

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2022

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2021

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2020

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2020

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2020

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2020

Collaborators (11)

Jacopo Tessarolo

Assistant Professor

Chonnam National University

SOUTH KOREA

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Guido Clever

Technische Universität Dortmund

GERMANY

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Atsushi Goto

National Institute for Materials Science

JAPAN

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Yohei Miyanoiri

Designated assistant professor

Nagoya University

JAPAN

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Hirokazu Yagi

Assistant Professor

Nagoya University

JAPAN

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Tohoku Medical and Pharmaceutical University

JAPAN

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Takumi Yamaguchi

Research Interests

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Articles (13)

Exploring glycoform-dependent dynamic modulations in human immunoglobulin G via computational and experimental approaches

The synergy of experimental and computational approaches for visualizing glycoprotein dynamics: Exploring order within the apparent disorder of glycan conformational ensembles

Further Refinement and Validation of the Drude Polarizable Force Field for Carboxylate and N-Acetyl amine Hexopyranose Derivatives

Effects of Different Adduct Ions, Ionization Temperatures, and Solvents on the Ion Mobility of Glycans

Refinement of the Drude Polarizable Force Field for Hexose Monosaccharides: Capturing Ring Conformational Dynamics with Enhanced Accuracy

Symmetry-breaking host–guest assembly in a hydrogen-bonded supramolecular system

Experimental and computational characterization of dynamic biomolecular interaction systems involving glycolipid glycans

Ribitol in Solution Is an Equilibrium of Asymmetric Conformations

Comprehensive characterization of oligosaccharide conformational ensembles with conformer classification by free-energy landscape via reproductive kernel Hilbert space

Field-stepwise-swept QCPMG solid-state 115In NMR of indium oxide

Remodeling of the Oligosaccharide Conformational Space in the Prebound State To Improve Lectin-Binding Affinity

Solid-state 17O NMR analysis of synthetically 17O-enriched d-glucosamine

Delineating the Dynamic Conformations of Oligosaccharides by Combining Molecular Simulation and NMR Spectroscopy

Collaborators (11)

Jacopo Tessarolo

Guido Clever

Atsushi Goto

Yohei Miyanoiri

Hirokazu Yagi

Yasuhiro Arikawa

Maho Yagi-Utsumi

Saeko Yanaka

Koichi Kato

Shinnosuke Horiuchi

Yoshiki Yamaguchi

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