William J. Griffiths
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Articles (11)
Year:
2023
LIPID MAPS (LIPID Metabolites and Pathways Strategy), www.lipidmaps.org, provides a systematic and standardized approach to organizing lipid structural and biochemical data. Founded 20 years ago, the LIPID MAPS nomenclature and classification has become the accepted community standard. LIPID MAPS provides databases for cataloging and identifying lipids at varying levels of characterization in addition to numerous software tools and educational resources, and became an ELIXIR-UK data resource in 2020. This paper describes the expansion of existing databases in LIPID MAPS, including richer metadata with literature provenance, taxonomic data and improved interoperability to facilitate FAIR compliance. A joint project funded by ELIXIR-UK, in collaboration with WikiPathways, curates and hosts pathway data, and annotates lipids in the context of their biochemical pathways. Updated features of the search infrastructure are described along with implementation of programmatic access via API and SPARQL. New lipid-specific databases have been developed and provision of lipidomics tools to the community has been updated. Training and engagement have been expanded with webinars, podcasts and an online training school.
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2023
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2022
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2022
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2021
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2021
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2021
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2021
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2020
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2020
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2020
Collaborators (13)
Alison Louise Dickson
University of St. Andrews
Patricia Raquel dos Santos Rodrigues
Cardiff University
Edward A Dennis
Distinguished Professor 2004-present; Chancellor Chair I 2019-present
University of California, San Diego
Malcolm Clench
Professor of Mass Spectrometry
Sheffield Hallam University
Valerie B O’Donnell
Cardiff University
Roberto Angelini
Lecturer
Swansea University Medical School
James Dunford
University of Oxford
James Cronin
Senior Lecturer
Swansea University Medical School
Jürgen Hartler
Assistant Professor
Graz University of Technology
Eylan Yutuc
Lecturer
Swansea University
David Thomas
Professor
Cardiff University
I Martin Sheldon
Swansea University Medical School
Junken Aoki
Professor
University of Tokyo
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