William J. Griffiths

Swansea University Medical School
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Articles (11)

Year:

2023

LIPID MAPS (LIPID Metabolites and Pathways Strategy), www.lipidmaps.org, provides a systematic and standardized approach to organizing lipid structural and biochemical data. Founded 20 years ago, the LIPID MAPS nomenclature and classification has become the accepted community standard. LIPID MAPS provides databases for cataloging and identifying lipids at varying levels of characterization in addition to numerous software tools and educational resources, and became an ELIXIR-UK data resource in 2020. This paper describes the expansion of existing databases in LIPID MAPS, including richer metadata with literature provenance, taxonomic data and improved interoperability to facilitate FAIR compliance. A joint project funded by ELIXIR-UK, in collaboration with WikiPathways, curates and hosts pathway data, and annotates lipids in the context of their biochemical pathways. Updated features of the search infrastructure are described along with implementation of programmatic access via API and SPARQL. New lipid-specific databases have been developed and provision of lipidomics tools to the community has been updated. Training and engagement have been expanded with webinars, podcasts and an online training school.

Year:

2023

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2022

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2022

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2021

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2021

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2021

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2021

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2020

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2020

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2020

Collaborators (13)

Alison Louise Dickson

University of St. Andrews

UNITED KINGDOM
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Patricia Raquel dos Santos Rodrigues

Cardiff University

UNITED KINGDOM
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Edward A Dennis

Distinguished Professor 2004-present; Chancellor Chair I 2019-present

University of California, San Diego

UNITED STATES
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Malcolm Clench

Professor of Mass Spectrometry

Sheffield Hallam University

UNITED KINGDOM
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Valerie B O’Donnell

Cardiff University

UNITED KINGDOM
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Roberto Angelini

Lecturer

Swansea University Medical School

UNITED KINGDOM
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James Dunford

University of Oxford

UNITED KINGDOM
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James Cronin

Senior Lecturer

Swansea University Medical School

UNITED KINGDOM
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Jürgen Hartler

Assistant Professor

Graz University of Technology

AUSTRIA
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Eylan Yutuc

Lecturer

Swansea University

UNITED KINGDOM
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David Thomas

Professor

Cardiff University

UNITED KINGDOM
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I Martin Sheldon

Swansea University Medical School

UNITED KINGDOM
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Junken Aoki

Professor

University of Tokyo

JAPAN
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