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Yan Shao

Senior Staff Scientist

Wellcome Sanger Institute

United Kingdom

Research Interests

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Articles (12)

Year:

2026

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2026

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2026

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2026

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2026

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2025

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2025

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2024

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2024

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2024

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2023

Year:

2023

Collaborators (18)

Andrew Nelson

Northumbria University

UNITED KINGDOM

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Mark Davies

Senior Research Fellow

University of Melbourne

AUSTRALIA

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Hilary Browne

University College Cork

IRELAND

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Benjamin Parcell

Academic, Clinical Senior Lecturer (Teaching and Research)/Hon Consultant

University of Dundee

UNITED KINGDOM

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Lauri Aaltonen

University of Helsinki

FINLAND

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Andre Mu

Senior Lecturer & Group Leader

MONASH UNIVERSITY

AUSTRALIA

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Craig Underhill

AUSTRALIA

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Andreas Behren

Olivia Newton-John Cancer Research Institute

AUSTRALIA

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James Berkley

Senior Research Group Leader

University of Oxford

UNITED KINGDOM

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Nigel Field

University College London

UNITED KINGDOM

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Aurora Taira

University of Helsinki

FINLAND

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Sudaraka Mallawaarachchi

University of Oslo

NORWAY

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Raymond Kiu

University of Birmingham

UNITED KINGDOM

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Gregory Young

Senior Research Associate

Newcastle University

UNITED KINGDOM

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Michael Stratton

Wellcome Sanger Institute

UNITED KINGDOM

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Lindsay J Hall

University of Birmingham

UNITED KINGDOM

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Alison Rodger

Professor of Infectious Diseases

University College London

UNITED KINGDOM

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Harry Thorpe

University of Oslo

NORWAY

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Yan Shao

Research Interests

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Articles (12)

Separating microbial signal from noise

Strain-level transmission inference across multi-kingdom metagenomic data using TRACS

Identification of transporter-dependent capsular loci associated with the invasive potential of Escherichia coli.

Clostridia from preterm infants metabolize human milk oligosaccharides to suppress pathobionts and modulate intestinal function in organoids

Genomic atlas of Bifidobacterium infantis and B. longum informs infant probiotic design.

Investigation of associations between the neonatal gut microbiota and severe viral lower respiratory tract infections in the first 2 years of life: a birth cohort study with metagenomics

A new strain of thought in gut metagenomics

A gut microbial signature for combination immune checkpoint blockade across cancer types

Geographical variation in the incidence of colorectal cancer and urinary tract cancer is associated with population exposure to colibactin-producing Escherichia coli.

Primary succession of Bifidobacteria drives pathogen resistance in neonatal microbiota assembly

Scrubbing contaminated microbiomes

Multi-level analysis of the gut–brain axis shows autism spectrum disorder-associated molecular and microbial profiles

Collaborators (18)

Andrew Nelson

Mark Davies

Hilary Browne

Benjamin Parcell

Lauri Aaltonen

Andre Mu

Craig Underhill

Andreas Behren

James Berkley

Nigel Field

Aurora Taira

Sudaraka Mallawaarachchi

Raymond Kiu

Gregory Young

Michael Stratton

Lindsay J Hall

Alison Rodger

Harry Thorpe

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