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Yanni Sun

City University of Hong Kong

Hong Kong

Research Interests

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Professors in Microbiology

Articles (20)

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Collaborators (5)

liao herui

Massachusetts Institute of Technology

UNITED STATES

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Fuyong Li

Professor

Zhejiang University

CHINA

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John Barton

Associate Professor

University of Pittsburgh School of Medicine

UNITED STATES

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Sibo Wang

Assistant Professor

The Chinese University of Hong Kong (CUHK)

HONG KONG

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Rui Zhang

Professor

Shenzhen University

CHINA

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Yanni Sun

Research Interests

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Articles (20)

PhageMind: generalized strain-level phage host range prediction via meta-learning

Linkage-aware inference of fitness from short-read time-series genomic data

GiantHost: a domain-adaptive and uncertainty-aware framework for giant virus host prediction

TPMM: three-component posterior mixture model enables robust inverton detection in low-depth metagenomes and suggests potential viral invertons

ViralQC: a tool for assessing completeness and contamination of predicted viral contigs

PhaBOX2: an enhanced web server for discovering and analyzing viral contigs in metagenomic data

A metatranscriptome based approach to predict multidrug resistance phenotypes in Klebsiella pneumoniae without culturing

Fast and accurate identification of emerging viral reassortment from genome sequences

PhaGCN_Cluster: A Scalable and Robust Framework for Automated Classification and Discovery of Viral Dark Matter from Metagenomes

Unraveling the activity of phage-carrying antibiotic resistance genes in constructed wetlands

PlasRAG: comprehensive plasmid characterization and retrieval through sequence-text alignment

RTTAP

Dissecting the gut microbial communities and resistomes of wild rats from different ecological areas in Hong Kong

Deep learning reveals hidden diversity of Synechococcus in the coastal water of China

From genomic signals to prediction tools: a critical feature analysis and rigorous benchmark for phage–host prediction

Galacto-oligosaccharides enrich galactosidase-encoded rather than all Lachnospiraceae bacteria to redress abnormal gut microbiota and lipid metabolism in pregnancy

SegFinder

GiantHunter

SmoothGNN: Smoothing-aware GNN for Unsupervised Node Anomaly Detection

MOSTPLAS: a self-correction multi-label learning model for plasmid host range prediction

Collaborators (5)

liao herui

Fuyong Li

John Barton

Sibo Wang

Rui Zhang

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