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Johanna Ivaska

8 months ago

Postdoctoral Researcher in Bioinformatics – Cell Adhesion and Cancer Group, Turku Bioscience Centre University of Turku in Finland

Degree Level

Postdoc

Field of study

Computer Science

Funding

Available

Deadline

Expired

Country flag

Country

Finland

University

University of Turku

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Keywords

Computer Science
Machine Learning
Biomarker Research
Biomedical Engineering
Biology
Computational Biology
Cancer Research
Synthetic Biology
Medical Science
Cell Adhesion
Statistics
Bioinformatic
Spatial Transcriptomic

About this position

The University of Turku invites applications for a postdoctoral researcher position in bioinformatics within the Cell Adhesion and Cancer Group at Turku Bioscience Centre. This interdisciplinary group, led by Professor Johanna Ivaska, is renowned for its innovative cancer research and collaborative environment. The successful candidate will play a pivotal role in analysing and integrating omics-based biological datasets, translating complex data into actionable biological insights, and developing analytical pipelines accessible to biologists. The group comprises 18 international researchers, including postdocs, PhD and Master’s students, technicians, and support staff, fostering skill development, cross-disciplinary learning, and scientific independence.

The position is part of the ERC Advanced Grant project 'BorderControl', which aims to elucidate the molecular signals enabling cancer cells to cross tissue borders. Research focuses on spatial profiling of the tumour–stroma interface to identify receptor–ligand interactions regulating invasion, using advanced techniques such as microfluidics-based imaging, single-cell and spatial profiling (scRNA-seq, mass cytometry, spatial transcriptomics), synthetic biology, high-throughput screening, and multicellular migration platforms. Clinical relevance is assessed through patient material and designer tissue microarrays, with close collaboration with clinicians and external experts.

Key responsibilities include developing and applying machine learning methods to biomedical questions, analysing and modelling diverse omics datasets, integrating data from spatial transcriptomics, scRNA-seq, bulk RNA-seq, proteomics, and immunohistochemistry, and analysing patient cohort samples including microscopy images. The role requires keeping abreast of rapidly evolving methods, collaborating with biomedical researchers, publishing in international journals, and participating in national and international networks.

Applicants must have a doctoral degree in bioinformatics, computer science, data science, or a related field; biologists trained in bioinformatics are also eligible. Candidates nearing completion of their doctoral studies may be considered as project researchers. Essential skills include experience with biological datasets, programming (R, Python), independent and collaborative work, initiative, self-direction, and excellent English communication. Advantageous skills include machine learning, deep learning, method development, cell biology, relevant publications, and advanced microscopy/image analysis.

The position offers a fixed-term contract from 1 April 2026 to 31 March 2028, with possible extension. Salary ranges from 3600–3800 €/month for postdoctoral researchers and 2800–3200 €/month for project researchers, determined by the Finnish university collective agreement. The University of Turku provides a top-level research environment, access to cutting-edge technologies, flexible working hours, support for professional development, and excellent networking opportunities. The institution values equality and diversity and encourages applicants from all backgrounds.

Applications must be submitted as a single PDF in English, including a motivation letter, CV, degree certificates, contact details of three referees, and any other relevant documents. Apply via the online application link. Applications are reviewed on a rolling basis, so early submission is recommended. For further information, contact Professor Johanna Ivaska or HR Specialist Paula Luoma.

Funding details

Available

What's required

Applicants must hold a doctoral degree in bioinformatics, computer science, data science, or a relevant field; biologists trained in bioinformatics are also considered. Candidates in the final stages of their doctoral studies may apply, but will be hired as project researchers until completion. Required skills include experience in analysing biological datasets (genomics, transcriptomics, proteomics), programming skills (R, Python), ability to work independently and collaboratively, initiative, self-direction, and excellent communication skills in English. Advantageous skills include machine learning, deep learning, method development in bioinformatics, cell biology, relevant publications, and experience in advanced light microscopy and image analysis. Degree certificates must be provided in English or Finnish, or officially translated.

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Professors

Professor at University of Turku

University Name
Country flag

Finland

Research Interests

Cell Biology

Tissue Engineering

Integrin Biology

Endocytosis

Cancer Biology