Andreas Bergthaler

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Professor

Medical University of Vienna
Country flagAustria

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Andreas Bergthaler is an Associate Professor at the Medical University of Vienna, Austria. His research focuses on virology, immunology, and cancer biology, as evidenced by his recent articles on wastewater virome analysis, SARS-CoV-2 breakthrough infections, and the molecular basis of muscle loss in cachexia. Additionally, he has contributed to the development of tools for single-cell immunometabolism research and has explored the evolutionary dynamics of transmissible cancers.

Positions (1)

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Andreas Bergthaler

University Name
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Medical University of Vienna

Postdoc and PhD openings in systemic immunometabolism at the Bergthaler Lab, Medical University of Vienna (MedUni Vienna), with close collaboration and access to core facilities at CeMM Austrian Academy of Sciences. The lab is recruiting one Postdoc and one PhD student to study how infection, immunity, adaptive immune responses, and cross-organ communication reshape metabolism and contribute to tissue wasting/cachexia. The project spans fundamental and disease-relevant questions from the single-cell level to the whole organism, with a strong emphasis on mechanistic biology. Research areas and methods: immunometabolism, immunology, infection, cancer-related cachexia, metabolism, tissue wasting, metabolic modelling, bioinformatics, computational biology, single-cell sequencing, spectral cytometry, metabolomics, metabolite tracing, metabolic cages, genetic and metabolic perturbations, and disease models. Eligibility highlights: candidates should have a degree in immunology, virology, molecular biology, metabolism, medicine, bioinformatics, computational biology, metabolic modelling, or a related field. Strong wet-lab, dry-lab, or hybrid skills are desired, along with initiative, critical thinking, teamwork, and clear communication. The lab welcomes applicants with their own project ideas. Funding: both positions are funded by the Austrian Science Fund (FWF) at FWF salary rates, with a flexible start date. How to apply: PhD applicants should apply through the MedUni Vienna PhD Call by 22 November 2026 . Postdoc applicants should email a single PDF with cover letter, CV, publication list, and three referees to [email protected] . Postdoc applications are reviewed on a rolling basis until filled. Location: Vienna, Austria.

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Articles (14)

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2025

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2024

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2024

Motivation Environmental monitoring of pathogens provides an accurate and timely source of information for public health authorities and policymakers. In the last 2 years, wastewater sequencing proved to be an effective way of detection and quantification of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants circulating in population. Wastewater sequencing produces substantial amounts of geographical and genomic data. Proper visualization of spatial and temporal patterns in these data is crucial for the assessment of the epidemiological situation and forecasting. Here, we present a web-based dashboard application for the visualization and analysis of data obtained from sequencing of environmental samples. The dashboard provides multi-layered visualization of geographical and genomic data. It allows to display frequencies of detected pathogen variants as well as individual mutation frequencies. The features of WAVES (Web-based tool for Analysis and Visualization of Environmental Samples) for early tracking and detection of novel variants in the wastewater are demonstrated in an example of BA.1 variant and the signature Spike mutation S: E484A. WAVES dashboard is easily customized through the editable configuration file and can be used for different types of pathogens and environmental samples. Availability and implementation WAVES source code is freely available at https://github.com/ptriska/WavesDash under MIT license. A demo version of this application can be accessed at: https://wavesdashboard.azurewebsites.net/.

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2023

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2023

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2023

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2023

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2022

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2021

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2021

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2021

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2021

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2021

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2021

Collaborators (8)

Hannes Stockinger

University Professor

Medical University of Vienna

AUSTRIA
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Manuela Baccarini

Universität Wien

AUSTRIA
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Monika Redlberger-Fritz

Medical University of Vienna

AUSTRIA
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Mathias Müller

Full Professor / Head of Institute

University of Veterinary Medicine

AUSTRIA
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Ursula Wiedermann

Medical University of Vienna

AUSTRIA
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Johannes Huppa

Professor

Medical University of Vienna

AUSTRIA
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Nina Cabezas Wallscheid

Full professor

ETH Zurich

SWITZERLAND
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Andrea Siebenhofer-Kroitzsch

Director / Univ. Prof. Dr. med. univ.

Medical University of Graz

AUSTRIA
View details
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