Benjamin Gyori

Northeastern University

United States

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Articles (13)

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2024

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2024

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2024

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2023

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2023

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2022

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2022

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2022

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2022

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2022

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2021

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2020

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2020

Collaborators (3)

Martin Hofmann-Apitius

GERMANY

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Peter Sorger

Otto Krayer Professor of Systems Pharmacology

Harvard Medical School

UNITED STATES

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Charles Hoyt

Northeastern University

UNITED STATES

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Benjamin Gyori

Research Interests

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Articles (13)

Beyond protein lists: AI-assisted interpretation of proteomic investigations in the context of evolving scientific knowledge

Nociceptor-immune interactomes reveal insult-specific immune signatures of pain

The O3 guidelines: open data, open code, and open infrastructure for sustainable curated scientific resources

Automated assembly of molecular mechanisms at scale from text mining and curated databases

Prediction and curation of missing biomedical identifier mappings with Biomappings

PyBioPAX: biological pathway exchange in Python.

STonKGs: A Sophisticated Transformer Trained on Biomedical Text and Knowledge Graphs.

Integrating multi-omics data reveals function and therapeutic potential of deubiquitinating enzymes

Automated Network Assembly of Mechanistic Literature for Informed Evidence Identification to Support Cancer Risk Assessment

Gilda: biomedical entity text normalization with machine-learned disambiguation as a service

From knowledge to models: Automated modeling in systems and synthetic biology

Robustness and parameter geography in post-translational modification systems

Adeft: Acromine-based Disambiguation of Entities from Text with applications to the biomedical literature

Collaborators (3)

Martin Hofmann-Apitius

Peter Sorger

Charles Hoyt

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