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Christian Fankhauser

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Director

University of Lausanne
Country flagSwitzerland

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Recent Grants

Grant: Open

The response to high plant density in a warmer climate: function and regulation of Phytochrome Interacting Factors

Open Date: 2025-01-01

Close Date: 2029-01-01

Grant: Close

Environmental and molecular determinants of aerial organ positioning in Arabidopsis.

Open Date: 2021-09-01

Close Date: 2025-08-31

Grant: Close

Primary-transformant-based analyses using fluorescence-activated large-object sorting

Open Date: 2020-12-01

Close Date: 2021-11-30

Grant: Close

Signal Integration in Plants: UV-B, Shade and Biotic Stress

Open Date: 2014-10-01

Close Date: 2017-09-30

Grant: Close

Circadian regulation of phototropism in Arabidopsis and potato

Open Date: 2014-05-01

Close Date: 2016-04-30

Articles (12)

Year:

2025

Year:

2025

Plants growing with neighbors compete for light and consequently increase the growth of their vegetative organs to enhance access to sunlight. This response, called shade avoidance syndrome (SAS), involves photoreceptors such as phytochromes as well as phytochrome interacting factors (PIFs), which regulate the expression of growth‐mediating genes. Numerous cell wall‐related genes belong to the putative targets of PIFs, and the importance of cell wall modifications for enabling growth was extensively shown in developmental models such as dark‐grown hypocotyl. However, the contribution of the cell wall in the growth of de‐etiolated seedlings regulated by shade cues remains poorly established. Through analyses of mechanical and biochemical properties of the cell wall coupled with transcriptomic analysis of cell wall‐related genes from previously published data, we provide evidence suggesting that cell wall modifications are important for neighbor proximity‐induced elongation. Further analysis using loss‐of‐function mutants impaired in the synthesis and remodeling of the main cell wall polymers corroborated this. We focused on the cgr2cgr3 double mutant that is defective in methylesterification of homogalacturonan (HG)‐type pectins. By following hypocotyl growth kinetically and spatially and analyzing the mechanical and biochemical properties of cell walls, we found that methylesterification of HG‐type pectins was required to enable global cell wall modifications underlying neighbor proximity‐induced hypocotyl growth. Collectively, our work suggests that plant competition for light induces changes in the expression of numerous cell wall genes to enable modifications in biochemical and mechanical properties of cell walls that contribute to neighbor proximity‐induced growth.

Year:

2024

Year:

2023

Year:

2022

Year:

2022

Year:

2022

Year:

2021

Year:

2021

Year:

2020

Year:

2020

Year:

2020

Collaborators (19)

Anne-Sophie Fiorucci

Assistant Professor

Université Paris-Saclay

FRANCE
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Julian Hibberd

professor

University of Cambridge

UNITED KINGDOM
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Lucia C. Strader

-

UNITED STATES
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Ronald Pierik

Professor

Utrecht University

NETHERLANDS
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Nicolas GUEX

Head, Bioinformatics Competence Center

University of Lausanne

SWITZERLAND
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Alessandra Boccaccini

Fixed-term Researcher

Università Campus Bio-Medico di Roma

ITALY
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Johanna Krahmer

Assistant Professor

University of Copenhagen

DENMARK
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Roman Ulm

Full Professor

University of Geneva

SWITZERLAND
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Samuel Zeeman

Professor of Plant Biochemistry

ETH Zürich

SWITZERLAND
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Julijana Ivanisevic

Head of Metabolomics Unit / Senior Lecturer

University of Lausanne, Faculty of Biology and Medicine

SWITZERLAND
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Giovanna Ambrosini

Senior Scientist

EPFL (École Polytechnique Fédérale de Lausanne)

SWITZERLAND
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Sénéchal Fabien

Lecturer

Université de Picardie Jules Verne

FRANCE
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Stacey Harmer

University of California

UNITED STATES
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Laetitia Fouillen

-

FRANCE
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Neelima R Sinha

University of California, Davis

UNITED STATES
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Alex A R Webb

University of Cambridge

UNITED KINGDOM
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Martina Legris

Assistant Professor

University of Neuchatel

SWITZERLAND
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Markus Schmid

Professor

Swedish University of Agricultural Sciences

SWEDEN
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Didier Reinhardt

Professor

University of Fribourg

SWITZERLAND
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