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Christian Fankhauser
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Recent Grants
Grant: Open
The response to high plant density in a warmer climate: function and regulation of Phytochrome Interacting Factors
Open Date: 2025-01-01
Close Date: 2029-01-01
Grant: Close
Environmental and molecular determinants of aerial organ positioning in Arabidopsis.
Open Date: 2021-09-01
Close Date: 2025-08-31
Grant: Close
Primary-transformant-based analyses using fluorescence-activated large-object sorting
Open Date: 2020-12-01
Close Date: 2021-11-30
Grant: Close
Signal Integration in Plants: UV-B, Shade and Biotic Stress
Open Date: 2014-10-01
Close Date: 2017-09-30
Grant: Close
Circadian regulation of phototropism in Arabidopsis and potato
Open Date: 2014-05-01
Close Date: 2016-04-30
Articles (12)
Year:
2025
Year:
2025
Plants growing with neighbors compete for light and consequently increase the growth of their vegetative organs to enhance access to sunlight. This response, called shade avoidance syndrome (SAS), involves photoreceptors such as phytochromes as well as phytochrome interacting factors (PIFs), which regulate the expression of growth‐mediating genes. Numerous cell wall‐related genes belong to the putative targets of PIFs, and the importance of cell wall modifications for enabling growth was extensively shown in developmental models such as dark‐grown hypocotyl. However, the contribution of the cell wall in the growth of de‐etiolated seedlings regulated by shade cues remains poorly established. Through analyses of mechanical and biochemical properties of the cell wall coupled with transcriptomic analysis of cell wall‐related genes from previously published data, we provide evidence suggesting that cell wall modifications are important for neighbor proximity‐induced elongation. Further analysis using loss‐of‐function mutants impaired in the synthesis and remodeling of the main cell wall polymers corroborated this. We focused on the cgr2cgr3 double mutant that is defective in methylesterification of homogalacturonan (HG)‐type pectins. By following hypocotyl growth kinetically and spatially and analyzing the mechanical and biochemical properties of cell walls, we found that methylesterification of HG‐type pectins was required to enable global cell wall modifications underlying neighbor proximity‐induced hypocotyl growth. Collectively, our work suggests that plant competition for light induces changes in the expression of numerous cell wall genes to enable modifications in biochemical and mechanical properties of cell walls that contribute to neighbor proximity‐induced growth.
Year:
2024
Year:
2023
Year:
2022
Year:
2022
Year:
2022
Year:
2021
Year:
2021
Year:
2020
Year:
2020
Year:
2020
Collaborators (19)
Anne-Sophie Fiorucci
Assistant Professor
Université Paris-Saclay
Julian Hibberd
professor
University of Cambridge
Lucia C. Strader
-
Ronald Pierik
Professor
Utrecht University
Nicolas GUEX
Head, Bioinformatics Competence Center
University of Lausanne
Alessandra Boccaccini
Fixed-term Researcher
Università Campus Bio-Medico di Roma
Johanna Krahmer
Assistant Professor
University of Copenhagen
Roman Ulm
Full Professor
University of Geneva
Samuel Zeeman
Professor of Plant Biochemistry
ETH Zürich
Julijana Ivanisevic
Head of Metabolomics Unit / Senior Lecturer
University of Lausanne, Faculty of Biology and Medicine
Giovanna Ambrosini
Senior Scientist
EPFL (École Polytechnique Fédérale de Lausanne)
Sénéchal Fabien
Lecturer
Université de Picardie Jules Verne
Stacey Harmer
University of California
Laetitia Fouillen
-
Neelima R Sinha
University of California, Davis
Alex A R Webb
University of Cambridge
Martina Legris
Assistant Professor
University of Neuchatel
Markus Schmid
Professor
Swedish University of Agricultural Sciences
Didier Reinhardt
Professor
University of Fribourg
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