David C Molik

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metabarcode | metagenomic | metagenetic | microbiome enrichment toolkit

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Articles (14)

Year:

2025

The lack of interoperable data standards among reference genome data-sharing platforms inhibits cross-platform analysis while increasing the risk of data provenance loss. Here, we describe the FAIR bioHeaders Reference genome (FHR), a metadata standard guided by the principles of Findability, Accessibility, Interoperability and Reuse (FAIR) in addition to the principles of Transparency, Responsibility, User focus, Sustainability and Technology. The objective of FHR is to provide an extensive set of data serialisation methods and minimum data field requirements while still maintaining extensibility, flexibility and expressivity in an increasingly decentralised genomic data ecosystem. The effort needed to implement FHR is low; FHR’s design philosophy ensures easy implementation while retaining the benefits gained from recording both machine and human-readable provenance.

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2024

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2024

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2024

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2024

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2024

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2023

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2022

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2022

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2022

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2021

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2021

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2021

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2020

Collaborators (8)

Amanda Stahlke

Assistant Professor

Colorado Mesa University

UNITED STATES
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Joseph Ong

University of California, Los Angeles

UNITED STATES
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Holly Goodson

Professor

University of Notre Dame

UNITED STATES
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Daniela Soto

University of California, Davis

UNITED STATES
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Matthew Sisk

Associate Professor of the Practice (GIS and Data Science)

University of Notre Dame

UNITED STATES
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Jonathan Jacobs

Research Professor

Syracuse University

UNITED STATES
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David Scott McVey

Professor/Director/Assocate Dean

University of Nebraska - Lincoln

UNITED STATES
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Stephen Richards

Assistant Professor

Baylor College of Medicine

UNITED STATES
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