Jonathan Jacobs

Research Professor

Syracuse University
Country flagUnited States

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About

Jonathan Jacobs is a Research Professor at Syracuse University, USA. His research areas include antitumorigenic mechanisms in leukemia cells, drug resistance in Candida auris, and pathogen detection workflows for infectious diseases. His recent publications highlight integrative approaches to genomic and transcriptomic analyses of clinical strains and the implications of viral infections on cell death and inflammation.

Articles (10)

Year:

2025

Year:

2025

The lack of interoperable data standards among reference genome data-sharing platforms inhibits cross-platform analysis while increasing the risk of data provenance loss. Here, we describe the FAIR bioHeaders Reference genome (FHR), a metadata standard guided by the principles of Findability, Accessibility, Interoperability and Reuse (FAIR) in addition to the principles of Transparency, Responsibility, User focus, Sustainability and Technology. The objective of FHR is to provide an extensive set of data serialisation methods and minimum data field requirements while still maintaining extensibility, flexibility and expressivity in an increasingly decentralised genomic data ecosystem. The effort needed to implement FHR is low; FHR’s design philosophy ensures easy implementation while retaining the benefits gained from recording both machine and human-readable provenance.

Year:

2024

Year:

2024

Year:

2023

Year:

2022

Year:

2022

Year:

2021

Year:

2020

Year:

2020

Collaborators (7)

Michael Daniel Barrera

Research Assistant Professor

George Mason University

UNITED STATES
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SUDHA CHATURVEDI

-

UNITED STATES
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Vishnu Chaturvedi

-

UNITED STATES
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David C Molik

-

UNITED STATES
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Stephen Richards

Assistant Professor

Baylor College of Medicine

UNITED STATES
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Samantha Jacobs

Associate Professor

Icahn School of Medicine at Mount Sinai

UNITED STATES
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Kylene Kehn-Hall

Professor

Virginia Polytechnic Institute and State University

UNITED STATES
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