Jonathan Jacobs
Research Professor
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About
Jonathan Jacobs is a Research Professor at Syracuse University, USA. His research areas include antitumorigenic mechanisms in leukemia cells, drug resistance in Candida auris, and pathogen detection workflows for infectious diseases. His recent publications highlight integrative approaches to genomic and transcriptomic analyses of clinical strains and the implications of viral infections on cell death and inflammation.
Articles (10)
Year:
2025
Year:
2025
The lack of interoperable data standards among reference genome data-sharing platforms inhibits cross-platform analysis while increasing the risk of data provenance loss. Here, we describe the FAIR bioHeaders Reference genome (FHR), a metadata standard guided by the principles of Findability, Accessibility, Interoperability and Reuse (FAIR) in addition to the principles of Transparency, Responsibility, User focus, Sustainability and Technology. The objective of FHR is to provide an extensive set of data serialisation methods and minimum data field requirements while still maintaining extensibility, flexibility and expressivity in an increasingly decentralised genomic data ecosystem. The effort needed to implement FHR is low; FHR’s design philosophy ensures easy implementation while retaining the benefits gained from recording both machine and human-readable provenance.
Year:
2024
Year:
2024
Year:
2023
Year:
2022
Year:
2022
Year:
2021
Year:
2020
Year:
2020
Collaborators (7)
Michael Daniel Barrera
Research Assistant Professor
George Mason University
SUDHA CHATURVEDI
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Vishnu Chaturvedi
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David C Molik
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Stephen Richards
Assistant Professor
Baylor College of Medicine
Samantha Jacobs
Associate Professor
Icahn School of Medicine at Mount Sinai
Kylene Kehn-Hall
Professor
Virginia Polytechnic Institute and State University
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