Jody Phelan

Assistant Professor

London School of Hygiene & Tropical Medicine

United Kingdom

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Articles (20)

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2024

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2023

Collaborators (13)

Laurent Dortet

Université Paris-Saclay

FRANCE

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Rachel Denholm

University of Bristol

UNITED KINGDOM

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Geraint Davies

Professor of Infection Pharmacology

University of Liverpool

UNITED KINGDOM

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Dong Xia

Senior Lecturer in Bioinformatics

Royal Veterinary College

UNITED KINGDOM

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Rémy A. Bonnin

Associated professor in Microbiology

Université de Paris Faculté de Santé

FRANCE

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Louisa A Messenger

Assistant Professor

University of Nevada

UNITED STATES

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Richard J. Wall

Assistant Professor

London School of Hygiene & Tropical Medicine

UNITED KINGDOM

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Christophe Noël SOLA

Enseignant Chercheur-PU/Professor of Microbiology, Senior Scientist

Université Paris-Saclay

FRANCE

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Bjorn Andersson

Karolinska Institutet

SWEDEN

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Peter Cherepanov

The Francis Crick Institute

UNITED KINGDOM

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Caroline Relton

University of Bristol

UNITED KINGDOM

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Taane Clark

Professor of Genomics and Global Health

London School of Hygiene & Tropical Medicine

UNITED KINGDOM

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Cyril Gaudin

Institut Pasteur de Lille

FRANCE

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Jody Phelan

Research Interests

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Articles (20)

Large-scale statistical analysis of Mycobacterium tuberculosis genome sequences identifies compensatory mutations associated with multi-drug resistance

Multi-platform whole genome sequencing for tuberculosis clinical and surveillance applications

New reference genomes to distinguish the sympatric malaria parasites, Plasmodium ovale curtisi and Plasmodium ovale wallikeri

Newly Identified Mycobacterium africanum Lineage 10, Central Africa

ResMAP—a saturation mutagenesis platform enabling parallel profiling of target-specific resistance-conferring mutations in Plasmodium

Recruitment of multi-segment genomic RNAs by Bluetongue virus requires a preformed RNA network

Comparisons of genome assembly tools for characterization of <i>Mycobacterium tuberculosis</i> genomes using hybrid sequencing technologies.

Whole genome sequencing analysis of Mycobacterium tuberculosis reveals circulating strain types and drug-resistance mutations in the Philippines.

Acute and long-term outcomes of SARS-CoV-2 infection in school-aged children in England: Study protocol for the joint analysis of the COVID-19 schools infection survey (SIS) and the COVID-19 mapping and mitigation in schools (CoMMinS) study.

Comparative genomics of Leishmania donovani progeny from genetic crosses in two sand fly species and impact on the diversity of diagnostic and vaccine candidates.

Emergence of KPC-3- and OXA-181-producing ST13 and ST17 Klebsiella pneumoniae in Portugal: genomic insights on national and international dissemination

Identification of two insecticide resistance markers in Ethiopian Anopheles stephensi mosquitoes using a multiplex amplicon sequencing assay.

Towards environmental detection, quantification, and molecular characterization of Anopheles stephensi and Aedes aegypti from experimental larval breeding sites.

Feature weighted models to address lineage dependency in drug-resistance prediction from Mycobacterium tuberculosis genome sequences

The Evolution and Transmission Dynamics of Multidrug-Resistant Tuberculosis in an Isolated High-Plateau Population of Tibet, China.

Genome-wide host-pathogen analyses reveal genetic interaction points in tuberculosis disease

National and regional prevalence of SARS-CoV-2 antibodies in primary and secondary school children in England: the School Infection Survey, a national open cohort study, November 2021SARS-CoV-2 antibody prevalence in school children.

Treatment Strategy for Rifampin-Susceptible Tuberculosis.

TB-ML—a framework for comparing machine learning approaches to predict drug resistance of Mycobacterium tuberculosis

Genetic mutations underlying isoniazid-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan

Collaborators (13)

Laurent Dortet

Rachel Denholm

Geraint Davies

Dong Xia

Rémy A. Bonnin

Louisa A Messenger

Richard J. Wall

Christophe Noël SOLA

Bjorn Andersson

Peter Cherepanov

Caroline Relton

Taane Clark

Cyril Gaudin

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