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John Lees

Research group leader

European Bioinformatics Institute

United Kingdom

Research Interests

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Professors in United Kingdom Professors in Microbiology Microbiology professors in United Kingdom

Articles (13)

Year:

2026

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2026

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2025

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2025

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2025

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2024

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2024

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2024

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2024

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2023

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2023

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2023

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2023

Collaborators (14)

Romain Derelle

Imperial College London

UNITED KINGDOM

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Rebecca Gladstone

University of Oslo

NORWAY

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Robert D Finn

Senior Scientist

European Molecular Biology Laboratory

GERMANY

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Mario Ramirez

Full Professor

Universidade do Porto Faculdade de Medicina

PORTUGAL

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Gerry Tonkin-Hill

Group Leader

Peter MacCallum Cancer Institute

AUSTRALIA

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Ajit Lalvani

Imperial College London

UNITED KINGDOM

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Joel Hellewell

European Bioinformatics Institute

UNITED KINGDOM

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Zamin Iqbal

Professor at Department of Life Sciences

University of Bath

UNITED KINGDOM

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Jukka Corander

University of Oslo

NORWAY

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Kim Remans

Head of the Protein Expression and Purification Core Facility

European Molecular Biology Laboratory

GERMANY

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Sarah Baines

University of Melbourne

AUSTRALIA

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David McMillan

Discipline Lead in Science, and Associate Professor in Microbiology

University of the Sunshine Coast

AUSTRALIA

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Lloyd Chapman

Lecturer in Mathematics and Statistics

University of Lancaster

UNITED KINGDOM

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Leonid Chindelevitch

Imperial College London

UNITED KINGDOM

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John Lees

Research Interests

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Articles (13)

Efficient sequence alignment against millions of prokaryotic genomes with LexicMap

Unlocking CRISPR-Cas9 editing for widely diverse Dictyostelid species

Reference-Free Variant Calling with Local Graph Construction with ska lo (SKA).

SBMLtoOdin and Menelmacar: interactive visualisation of systems biology models for expert and non-expert audiences

Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm

Inter-species gene flow drives ongoing evolution of Streptococcus pyogenes and Streptococcus dysgalactiae subsp. equisimilis.

Seamless, rapid, and accurate analyses of outbreak genomic data using split K-mer analysis.

CELEBRIMBOR: core and accessory genes from metagenomes

Optimising machine learning prediction of minimum inhibitory concentrations in Klebsiella pneumoniae

Inferring the heritability of bacterial traits in the era of machine learning

fastlin: an ultra-fast program for <i>Mycobacterium tuberculosis</i> complex lineage typing

Impact of vaccinations, boosters and lockdowns on COVID-19 waves in French Polynesia

Accurate and fast graph-based pangenome annotation and clustering with ggCaller

Collaborators (14)

Romain Derelle

Rebecca Gladstone

Robert D Finn

Mario Ramirez

Gerry Tonkin-Hill

Ajit Lalvani

Joel Hellewell

Zamin Iqbal

Jukka Corander

Kim Remans

Sarah Baines

David McMillan

Lloyd Chapman

Leonid Chindelevitch

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