Li Chen

Associate Professor

University of Florida

United States

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Articles (12)

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2024

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2024

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2023

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2023

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2022

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2022

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2021

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2021

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2021

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2020

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2020

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2020

Collaborators (6)

Yuchao Jiang

Assistant Professor

University of North Carolina at Chapel Hill

UNITED STATES

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Peng Jin

Emory University

UNITED STATES

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AMIT MITRA

ASSISTANT PROFESSOR

UNITED STATES

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Bing Yao

Associate Professor

Emory University

UNITED STATES

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Xin Ma

University of Florida

UNITED STATES

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Salisa Westrick

Professor

Auburn University

UNITED STATES

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Li Chen

Research Interests

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Articles (12)

Deep5hmC: predicting genome-wide 5-hydroxymethylcytosine landscape via a multimodal deep learning model

scaDA: A novel statistical method for differential analysis of single-cell chromatin accessibility sequencing data

TIVAN-indel: a computational framework for annotating and predicting non-coding regulatory small insertions and deletions

DeepPHiC: predicting promoter-centered chromatin interactions using a novel deep learning approach

DeepPerVar: a multi-modal deep learning framework for functional interpretation of genetic variants in personal genome

Exploiting deep transfer learning for the prediction of functional non-coding variants using genomic sequence

5-hydroxymethylcytosine is dynamically regulated during forebrain organoid development and aberrantly altered in Alzheimer's disease.

National trends in prescription proton pump inhibitor use and expenditure in the United States in 2002-2017

Genome-wide circadian rhythm detection methods: systematic evaluations and practical guidelines

In vitro and ex vivo gene expression profiling reveals differential kinetic response of HSPs and UPR genes is associated with PI resistance in multiple myeloma.

Application of topic models to a compendium of ChIP-Seq datasets uncovers recurrent transcriptional regulatory modules

powmic: an R package for power assessment in microbiome case-control studies.

Collaborators (6)

Yuchao Jiang

Peng Jin

AMIT MITRA

Bing Yao

Xin Ma

Salisa Westrick

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