Nadezhda T. Doncheva

Københavns Universitet

Denmark

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Articles (16)

Year:

2025

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2025

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2025

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2024

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2024

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2024

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2023

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2023

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2023

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2023

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2023

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2023

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2022

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2022

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2021

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2021

Collaborators (20)

Jeppe Vinther

Københavns Universitet

DENMARK

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Jan Gorodkin

Professor

University of Copenhagen

DENMARK

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Oana Palasca

Københavns Universitet

DENMARK

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Mathew Blurton-Jones

Professor

University of California, Irvine

UNITED STATES

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Ernst Stefan Seemann

Københavns Universitet

DENMARK

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Alexandra Stripp Rebak

Københavns Universitet

DENMARK

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Ricardo M. Biondi

GERMANY

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Christian von Mering

University of Zurich

SWITZERLAND

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Caroline Jachmann

Ghent University

BELGIUM

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Thomas Rattei

Universität Wien

AUSTRIA

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Abinaya Chandrasekaran

Assistant Professor

University of Copenhagen

DENMARK

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Lene Terslev

DENMARK

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Hans H. Wandall

University of Copenhagen

DENMARK

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Georgios Pavlopoulos

Director of Research (Bioinformatics Research Professor)

Biomedical Sciences Research Center Alexander Fleming

GREECE

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Giulia Ilaria Corsi

Københavns Universitet

DENMARK

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Caroline Linnea Elin Lennartsson

Københavns Universitet

DENMARK

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Thomas Litman

Københavns Universitet

DENMARK

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Kristine Freude

Associate Professor

University of Copenhagen

DENMARK

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Veit Schwämmle

University of Southern Denmark

DENMARK

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Noortje de Haan

Københavns Universitet

DENMARK

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Nadezhda T. Doncheva

Research Interests

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Articles (16)

The STRING database in 2025: protein networks with directionality of regulation.

PathwayPilot: A User-Friendly Tool for Visualizing and Navigating Metabolic Pathways

Understanding Data Analysis Steps in Mass-Spectrometry-Based Proteomics Is Key to Transparent Reporting

A quantitative and site-specific atlas of the citrullinome reveals widespread existence of citrullination and insights into PADI4 substrates

Functional Analysis of MS-Based Proteomics Data: From Protein Groups to Networks

Streamlined analysis of drug targets by proteome integral solubility alteration indicates organ-specific engagement

Alteration of microglial metabolism and inflammatory profile contributes to neurotoxicity in a hiPSC-derived microglia model of frontotemporal dementia 3.

Golgi fragmentation - One of the earliest organelle phenotypes in Alzheimer's disease neurons.

Cross-species high-resolution transcriptome profiling suggests biomarkers and therapeutic targets for ulcerative colitis.

Cytoscape stringApp 2.0

The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest.

Arena3Dweb: interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration

The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression.

The impact of PrsA over-expression on the <i>Bacillus subtilis</i> transcriptome during fed-batch fermentation of alpha-amylase production.

Correction to ‘The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets’

Epistatic interactions promote persistence of NS3-Q80K in HCV infection by compensating for protein folding instability

Collaborators (20)

Jeppe Vinther

Jan Gorodkin

Oana Palasca

Mathew Blurton-Jones

Ernst Stefan Seemann

Alexandra Stripp Rebak

Ricardo M. Biondi

Christian von Mering

Caroline Jachmann

Thomas Rattei

Abinaya Chandrasekaran

Lene Terslev

Hans H. Wandall

Georgios Pavlopoulos

Giulia Ilaria Corsi

Caroline Linnea Elin Lennartsson

Thomas Litman

Kristine Freude

Veit Schwämmle

Noortje de Haan

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